Gene Patl_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1828 
Symbol 
ID4173013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2202982 
End bp2203878 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content49% 
IMG OID638054837 
Productcarboxylesterase 
Protein accessionYP_661402 
Protein GI109898147 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0463121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGTC AACAGCAAAT GAGCGCTGCC TCAAGCGACA CTTCGAGCAT AATCGAAGTG 
TCAGCAAATC GTTGCTTTGG CGGTTGGCAG AAGCGTTTTA GCCACCAATC CGCTGTACTG
AACTGTGAAA TGCACTTTAG CGTGTATTTG CCCCCAGCCG CTGAACTAAG CAAACCGCTG
CCTGTAGTCT ATTGGTTAAG CGGATTCACC TGTACAGATG AAAACTTTGT CACCAAAGCC
GGTGCACAGC GCGTTGCCAG TGAGCTGGGC ATCATGCTTG TCATACCTGA CACCAGCCCG
CGAGGTGATG CTGTACCTGA TGCTGACGAC AAAGCCTATG ACTTAGGTTT AGGGGCAGGA
TTTTATGTGA ATGCAACCCA AGCCCCTTGG GCTGAGCATT ACCGCATGTA CGACTACATC
GTCGACGAAC TGCCCGTCCT CATTCAGCAG CACTTCAAAG TACAACCTAA AGCAGCGATT
GCAGGGCATT CAATGGGCGG CCACGGTGCG CTTATGATTG CCTTGTCAAA TGTGAAACGC
TTTAGTTCCG TGTCGGCCTT TTCACCGATT GTGAATCCGA TGGAATGCCC GTGGGGACAA
AAAGCCTTCA GTCATTATTT AGGTGACGAT AAAAGCGAAT GGCAACAATA CGACAGCTGT
GAGCTAATGC GCCAGCAAGG CCAATTTTTA CAATTGCCTA TGTTGATTGA TCAAGGCCTA
GCGGATGACT TTTACCAAAG CCAAAAGTTA GCCAAACCGC TTGAGACGAT AGCACAAGAG
ATAAACTACC CAGCTGAGTT TCGATACCAC AACGGTTATG ATCATAGCTA CTTTTTCATC
AGCAGCTTTA TTGAAGATCA CTTGCGCTTT CACGCTAAGC ATTTAGCCGA GTCGTAG
 
Protein sequence
MSGQQQMSAA SSDTSSIIEV SANRCFGGWQ KRFSHQSAVL NCEMHFSVYL PPAAELSKPL 
PVVYWLSGFT CTDENFVTKA GAQRVASELG IMLVIPDTSP RGDAVPDADD KAYDLGLGAG
FYVNATQAPW AEHYRMYDYI VDELPVLIQQ HFKVQPKAAI AGHSMGGHGA LMIALSNVKR
FSSVSAFSPI VNPMECPWGQ KAFSHYLGDD KSEWQQYDSC ELMRQQGQFL QLPMLIDQGL
ADDFYQSQKL AKPLETIAQE INYPAEFRYH NGYDHSYFFI SSFIEDHLRF HAKHLAES