Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1818 |
Symbol | |
ID | 4172066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2184581 |
End bp | 2186659 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054828 |
Product | peptidase S9, prolyl oligopeptidase active site region |
Protein accession | YP_661393 |
Protein GI | 109898138 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0201758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATTAA TCAAAAAATC GATCGCGCTG GCGATGCTGG TTGGCCCATT GGCCATAACG GCCAGTAACG CCTTGGCTCA GACCACAGAA AACACCCTCA AACTGCAAGA TGTATTCACT TTAGAATATG CCTCAGGCCT GGATATTACC AAGGATGGTG AAACCGTTTA TTTCGTGCGT AACTACATGG ACATTCAAAA CGATAAAAAA CGTGGCAACA TCTGGAAGGT CGATAAAAAT AACGTAATGA CTCCAGTGAC CAATGGCTTA CATGCTGATT TCAGCCCTAC CTTGTCACCT GATGAAAGCA AGTTAGCTTA TATCTCGACC GCAAGCGGCT CAGCGCAAAT CCACATCAAA TGGCTAAACA CCGGGCAAAC AGGTCAAATG ACCCATCTAA CGGGCTCTCC GTCTAATCTT AGCTGGTCAC CCGACGGTAA AATGCTTGCC TTTAGTCAGT TTGTGAAAGG CACGCCTAAA TCCCCCGTGA ATTTGTCAGG CAAACCGGAG GGTGCCAAGT GGGCGGACTC GGCTATTTTT ATTGACGATT TATTTTATCG GGCAGACGGT GCGGGTTATA TCCCGGCAGG AAATAACCAA ATTTTTGTAC TCTCAGCGGA TGGCGGCACC CCTCGGCAAC TCACCCAAGG TGAGTTTAAC CACGGGGGCA GTATCAGTTG GAGCAGCGAT AGCAAAGCCA TTGTTTTCTC GGCAAATCGG CACCCCGACA GTGATTTAGA GCTCACCGAT GACAACGTAT ATAAGGTGGA TGTAGCCAGT GGCGAGATGC TGCAGCTAAC CGATCGTATT GGTCCAGATA ACAGCCCATT GGTCTCTCCT GACGGCAAAT TGATTGCCTA TTTGGGATAC GATGAAAAGT ACACTAACTA CGAGAATACT CAGCTTTACA TCATGGATGC TAATGGTGGC GTGAGTCGCT CCCTTACCTC TGAGTTCGAC CGCTCGGTAG GCAGTATACA ATGGGCGAGC GATAGCAAAG GCGTGTACCT AAGTTATGAC GATAGCGGCG AAACCTATGT GGCTTACCAG CCCTTACAAG GTGACCGAAA GATTGTTGCT GACAAAGTTG GCGGCTTGGC GTTTGGGCGA CCTTACTCGG GCGGTGAGTT TGATGTAGCC AACAATGGCA CCGTGGCGTT CACTTACTCA AACCCACAGC GCCCAGCTGA CATTGCTATC AAAAAAGGTG ACAAGGCCAC GTTACTCACC CAATTAAATG AAGATGCCCT CGCCCATAAA GACATAGCAA GCATCAAACC ATTGAGCCTT AAGTCGTCTT TTGACGAATT GCCTATTCAG GCATGGGTTG CTTACCCGCC GGGGTTTGAA CAAGGCAAAA AAGAAGGCAA ACGCTACCCG CTTATCTTAG AGATACACGG GGGGCCGGTC GCCAATTACG GGCCGCATTT TTCCACTGAA ATTCAGCTAA TGGCAGCGCA AGGTTATGTA GTGGTATACG CAAACCCACG AGGCAGTGAT AGCTACGGAA AAGACTTCGC GCAAACTATC GATAAAAACT ACCCAAGCCA GGATTACGAT GATTTGATGT CCACGGTAGA TGCCGTGATT GCTCAAGGCG CAATCGATGA GAAAAACTTA TTTGTGACAG GTGGCTCAGG TGGCGGTACC TTGACTGCGT GGATTGTGGG TCACACCGAG CGTTTTACCG CAGCCGTTGT CGCTAAACCG GTAATAAACT GGTACAGCTT TGTATTAACG TCTGATTTTT ACCCGTTTTT CTATAAGAAT TGGTTTGGTA AAAAGCCTTG GGAAGCGCAA GACTTATACA TGAAGCACTC GCCTATCAGT TACGTAGGCA ACGTCACCAC CCCCACTATG TTACTCACTG GTGAGTCAGA TCACCGCACG CCGATTTCGG AAACAGAGCA GTATTATCAA GCGTTGAAAT TACAGGGCGT TGAATCAGCA ATGGTGCGTA TACCGGGCGC ATCACACGGA ATTTACGCTA GGCCAAGTAA CTTAATGGCA AAGGTCGGCT ATATCCTTTG GTGGTTTGAT GAGCATCGCA CAGATAAAGA CACACCTAAG AGCAAATAA
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Protein sequence | MKLIKKSIAL AMLVGPLAIT ASNALAQTTE NTLKLQDVFT LEYASGLDIT KDGETVYFVR NYMDIQNDKK RGNIWKVDKN NVMTPVTNGL HADFSPTLSP DESKLAYIST ASGSAQIHIK WLNTGQTGQM THLTGSPSNL SWSPDGKMLA FSQFVKGTPK SPVNLSGKPE GAKWADSAIF IDDLFYRADG AGYIPAGNNQ IFVLSADGGT PRQLTQGEFN HGGSISWSSD SKAIVFSANR HPDSDLELTD DNVYKVDVAS GEMLQLTDRI GPDNSPLVSP DGKLIAYLGY DEKYTNYENT QLYIMDANGG VSRSLTSEFD RSVGSIQWAS DSKGVYLSYD DSGETYVAYQ PLQGDRKIVA DKVGGLAFGR PYSGGEFDVA NNGTVAFTYS NPQRPADIAI KKGDKATLLT QLNEDALAHK DIASIKPLSL KSSFDELPIQ AWVAYPPGFE QGKKEGKRYP LILEIHGGPV ANYGPHFSTE IQLMAAQGYV VVYANPRGSD SYGKDFAQTI DKNYPSQDYD DLMSTVDAVI AQGAIDEKNL FVTGGSGGGT LTAWIVGHTE RFTAAVVAKP VINWYSFVLT SDFYPFFYKN WFGKKPWEAQ DLYMKHSPIS YVGNVTTPTM LLTGESDHRT PISETEQYYQ ALKLQGVESA MVRIPGASHG IYARPSNLMA KVGYILWWFD EHRTDKDTPK SK
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