| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1815 |
|---|
| Symbol | |
|---|
| ID | 4172063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 2181636 |
|---|
| End bp | 2182031 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638054825 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661390 |
|---|
| Protein GI | 109898135 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.929005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAA TTGTTAAAAC TTCTATCGCT ATCGCTGCTA CCTCTATTAT CTTCGCTGCC
CCTGCACAAG CGGACGTAGC CGAAGCATTA CAAAATATAT GCACTATCGT AAAAGCCGAT
GATAAAGGCG AGTTACGCAA AAAAATGAAA CGCGTGCAGT CTGATTATCG CCTTAAGTTA
CAAGATTACT ACTCTGGTAT CAGCTGTGGA GGCAATAGCC TTATCCGCAC CGCGATGCTA
AATGATGCGG TTGAAACTGG CACCCTAATG GTTAAAAAAA TGCCTAAAAG TGATTTAAGC
TCTCCTGAAA AAGACGGCAA AACGGTTGTG GCCTGGGCAT CAGAAAATGG CCTAACCGCC
TCACCTATTG TTGCTGTTCT AAACGACCGC ATCTAG
|
|---|
| Protein sequence | MLKIVKTSIA IAATSIIFAA PAQADVAEAL QNICTIVKAD DKGELRKKMK RVQSDYRLKL
QDYYSGISCG GNSLIRTAML NDAVETGTLM VKKMPKSDLS SPEKDGKTVV AWASENGLTA
SPIVAVLNDR I
|
|---|
| |