Gene Patl_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1813 
Symbol 
ID4172061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2179342 
End bp2180376 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content45% 
IMG OID638054823 
Productaminoglycoside phosphotransferase 
Protein accessionYP_661388 
Protein GI109898133 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGC AAAGCGCTGT AGAGCAATTA GATGAAGCAA AATTAGCCAC CTATTTAGCG 
CAACATATTG CCGGTTTTAG TGGCCCTGTA AAGGCCACTA AATTTGCAGG TGGGCAGTCA
AACCCTACTT TTAAATTGCA AACTGCGAAC GCAACCTATG TGTTACGTCG CCAACCGCCG
GGTAAGTTGT TGAAGTCGGC CCATGCGGTT GACCGTGAAT ATCGTGTTAT TAAAGCATTG
GAAAACACTG ATGTCCCAGT GGCCAAGGTT TATCATCTTT GTGAAGACGT TGATGTTATT
GGCAGTATGT TTTATGTCAT GGAGTTTATG GACGGCAACG TCTATTGGGA CAGTTCGTTA
CCTGAAATGG CCGATAAACA AACCCGCAGC ACCATGTACC AGAATATGGT CACGGTCATG
GCGACCATGC ATAGTGTTAA TGTGGATGAG GTCGGCCTTG GGGACTATGG AAAGCCGGGT
AATTACTTTG AGCGCCAAAT AAGTCGCTGG ACCAAGCAAT ACCGTTTATC TGAAACCCAC
GAAATTCCTG AAATGGATCA ACTCATAAGC TGGTTAGAAA CCAACATTCC AGCTGATGAT
GGCAAAGTCT CGTTAGTACA CGGTGATTAT CGTATGGACA ATTTGATGTT CGCCAAAGAT
TCAACAGACA TTATTGCTGT GCTGGATTGG GAGTTATCGA CTTTAGGTCA TCCCTATGCC
GATTTAGCTT ACCAGTGTAT GCAATTACGC CTACCAGATA ACGTAGGTAA AGCGACCGGG
CTGGGTGATG TCGACAGAGC CGCACTGGGT ATTCCAAGTG AAGAAGAATA CGTTGCACAA
TACTGCAAAC TGGTAGGTAT TAATGGGATA GAGAACTGGA ATTTTTATTT GGCATTCAGC
TTTTTCAGAC TAGGGGCTAT CGCCCAAGGC GTGGCTAAGC GAGCGGTTGA TGGCAATGCG
TCGAATAAAC AAGCGCTGCA AGTAGGCAAG CTTGTGCAAC CTTTAGCGCA ATACGCCTTA
AAAATTCTTA AGTAA
 
Protein sequence
MSKQSAVEQL DEAKLATYLA QHIAGFSGPV KATKFAGGQS NPTFKLQTAN ATYVLRRQPP 
GKLLKSAHAV DREYRVIKAL ENTDVPVAKV YHLCEDVDVI GSMFYVMEFM DGNVYWDSSL
PEMADKQTRS TMYQNMVTVM ATMHSVNVDE VGLGDYGKPG NYFERQISRW TKQYRLSETH
EIPEMDQLIS WLETNIPADD GKVSLVHGDY RMDNLMFAKD STDIIAVLDW ELSTLGHPYA
DLAYQCMQLR LPDNVGKATG LGDVDRAALG IPSEEEYVAQ YCKLVGINGI ENWNFYLAFS
FFRLGAIAQG VAKRAVDGNA SNKQALQVGK LVQPLAQYAL KILK