Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1813 |
Symbol | |
ID | 4172061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2179342 |
End bp | 2180376 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054823 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_661388 |
Protein GI | 109898133 |
COG category | [R] General function prediction only |
COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGC AAAGCGCTGT AGAGCAATTA GATGAAGCAA AATTAGCCAC CTATTTAGCG CAACATATTG CCGGTTTTAG TGGCCCTGTA AAGGCCACTA AATTTGCAGG TGGGCAGTCA AACCCTACTT TTAAATTGCA AACTGCGAAC GCAACCTATG TGTTACGTCG CCAACCGCCG GGTAAGTTGT TGAAGTCGGC CCATGCGGTT GACCGTGAAT ATCGTGTTAT TAAAGCATTG GAAAACACTG ATGTCCCAGT GGCCAAGGTT TATCATCTTT GTGAAGACGT TGATGTTATT GGCAGTATGT TTTATGTCAT GGAGTTTATG GACGGCAACG TCTATTGGGA CAGTTCGTTA CCTGAAATGG CCGATAAACA AACCCGCAGC ACCATGTACC AGAATATGGT CACGGTCATG GCGACCATGC ATAGTGTTAA TGTGGATGAG GTCGGCCTTG GGGACTATGG AAAGCCGGGT AATTACTTTG AGCGCCAAAT AAGTCGCTGG ACCAAGCAAT ACCGTTTATC TGAAACCCAC GAAATTCCTG AAATGGATCA ACTCATAAGC TGGTTAGAAA CCAACATTCC AGCTGATGAT GGCAAAGTCT CGTTAGTACA CGGTGATTAT CGTATGGACA ATTTGATGTT CGCCAAAGAT TCAACAGACA TTATTGCTGT GCTGGATTGG GAGTTATCGA CTTTAGGTCA TCCCTATGCC GATTTAGCTT ACCAGTGTAT GCAATTACGC CTACCAGATA ACGTAGGTAA AGCGACCGGG CTGGGTGATG TCGACAGAGC CGCACTGGGT ATTCCAAGTG AAGAAGAATA CGTTGCACAA TACTGCAAAC TGGTAGGTAT TAATGGGATA GAGAACTGGA ATTTTTATTT GGCATTCAGC TTTTTCAGAC TAGGGGCTAT CGCCCAAGGC GTGGCTAAGC GAGCGGTTGA TGGCAATGCG TCGAATAAAC AAGCGCTGCA AGTAGGCAAG CTTGTGCAAC CTTTAGCGCA ATACGCCTTA AAAATTCTTA AGTAA
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Protein sequence | MSKQSAVEQL DEAKLATYLA QHIAGFSGPV KATKFAGGQS NPTFKLQTAN ATYVLRRQPP GKLLKSAHAV DREYRVIKAL ENTDVPVAKV YHLCEDVDVI GSMFYVMEFM DGNVYWDSSL PEMADKQTRS TMYQNMVTVM ATMHSVNVDE VGLGDYGKPG NYFERQISRW TKQYRLSETH EIPEMDQLIS WLETNIPADD GKVSLVHGDY RMDNLMFAKD STDIIAVLDW ELSTLGHPYA DLAYQCMQLR LPDNVGKATG LGDVDRAALG IPSEEEYVAQ YCKLVGINGI ENWNFYLAFS FFRLGAIAQG VAKRAVDGNA SNKQALQVGK LVQPLAQYAL KILK
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