Gene Patl_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1811 
Symbol 
ID4172059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2177408 
End bp2178085 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID638054821 
Productphosphoglycerate mutase 
Protein accessionYP_661386 
Protein GI109898131 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGT TTTATATCGT GCGACACGGT CAGGCGTCTT TTGGTGCTGC CAATTACGAC 
AAACTTAGCG AGTTAGGTCA TCAGCAGTCA GTTTGGTTGG GTGAGTATTT CGCTCAACGG 
AATATGACGT TCGGTCAGCT TTGGTTAGGG GAGATGGTTC GTCATCAAGA AACGGCGGCC 
GGCATCTGTA AGGGGTTACG CACCGAAATT GAGACTTCGA CACATACGGG GTTAAATGAG 
TTCGATTTTC AAAATATCGC AGCCGCTTAT TTAGCCCAGC ACCCAAATGA TGCGGTGCAA 
AAAGGCGCTC CTCCAGCAGA GTTTTATCGG TTGCTGAAAA AAGCCATGGG CGCTTGGTCT 
GCTGAGCAAC TCGACCCCAG TATGCTCAAT GAAACTTGGG TGCAATTTCG CCAACGTGTA 
TTTGATGTAC TCGATGTATT GGGGCAGAAA AGTCACGATA AACCTGTCCT ATTGGTGAGC 
TCGGGTGGGG CTATCTCTAT GCTAATGAGC ATTGTTCTTG AGCTTGAGGC GAAGCATGTT 
ATCGAGCTGA ACATGCAAGT GCGAAACGCC AGCTACAGTC ATTTCTTTTT TAATCGCGAC 
ACCGTGCGGT TAAGCAGCTT CAATAATGTA CCTCACCTTG ATATACCCGA GCGTGTTGGT 
GCCGTCACGT TTAGTTAA
 
Protein sequence
MSEFYIVRHG QASFGAANYD KLSELGHQQS VWLGEYFAQR NMTFGQLWLG EMVRHQETAA 
GICKGLRTEI ETSTHTGLNE FDFQNIAAAY LAQHPNDAVQ KGAPPAEFYR LLKKAMGAWS 
AEQLDPSMLN ETWVQFRQRV FDVLDVLGQK SHDKPVLLVS SGGAISMLMS IVLELEAKHV 
IELNMQVRNA SYSHFFFNRD TVRLSSFNNV PHLDIPERVG AVTFS