Gene Patl_1809 details

Gene Information

• Locus tag: Patl_1809
• ID: 4172057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 2173646
• End bp: 2174341
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638054819
• Product: peptidase E
• Protein accession: YP_661384
• Protein GI: 109898129
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3340] Peptidase E

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAGCA GCTCACGTGC AGGTGATGAA GAATATTTAA CCCATGCCAG TCAAATGATT 
GCTCGGCATT TAGCTCGGTG TGAGCGTATC GTGTTTATTC CCTACGCTGG CGTCACCATT 
GATTGGCCGA ACTACACCCA AAAAGTACAA GCCGCTTTGC CAAAGCTCAA TATTGTTGGC 
ATCGAGTCTT TTGATGATCC CGTGACTGCC ATCGCTCAAG CCGATGCTGT TATGGTGGGA 
GGCGGCAACA CATTTCATTT ATTAAACCAG CTTTATGTAA AAGGCCTCAT AAACCCTATT 
CGTGAACGAG CGAAAAACGG TATGCCCTAT GTTGGCTGGA GCGCGGGCTC CAATATTTGT 
GGGAATACAA TTCGTACGAC TAATGACATG CCAATAGTCT ATCCCCCTTC GTTTGAGGCG 
CTTAATTTAG TACCTTTTCA ACTTAACCCT CATTACAGCG ATTATCAACC GCCTGGCCAC 
AACGGAGAAA CACGCGCCCA GCGAATAGCC GAGTTTTGTG TTTTAAACCC AGGGATGCCG 
GTGTTGGGTA TTAAAGAAGG CACGGCATTG GTTCGACAAG GTGACACGTT GACGCTACAA 
GGACCTCACA ATGGGGTTGT GTTTAAAGCT GAGCACCAAA GCGTGATCCA GCCTTTGCAA 
GATTGTTCTT CGTATTTAGT CGTGGGCGCT GAATAG 

 

Protein sequence

MLSSSRAGDE EYLTHASQMI ARHLARCERI VFIPYAGVTI DWPNYTQKVQ AALPKLNIVG 
IESFDDPVTA IAQADAVMVG GGNTFHLLNQ LYVKGLINPI RERAKNGMPY VGWSAGSNIC 
GNTIRTTNDM PIVYPPSFEA LNLVPFQLNP HYSDYQPPGH NGETRAQRIA EFCVLNPGMP 
VLGIKEGTAL VRQGDTLTLQ GPHNGVVFKA EHQSVIQPLQ DCSSYLVVGA E