| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1808 |
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| Symbol | |
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| ID | 4172056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2172537 |
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| End bp | 2173541 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054818 |
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| Product | luciferase-like |
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| Protein accession | YP_661383 |
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| Protein GI | 109898128 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTA CCACTGCGTT TTCAATTTTA GATTTAGCCC CCATTGTGCA AGGGCAAAAC
ATTTCTCAGA CACTCGAAAA CAGTCGTCAG ATGGCGGTGC AAGCAGAGCA ATTGGGTTAC
AACCGAGTTT GGTTAGCGGA GCATCATGGT ATGCGCGGTG TCGGCAGTTC AGCTACTTCG
GTGGTGCTTG GTCACATTGG CGCTGCCACC CGCAAGATTC GGATAGGATC CGGTGGCGTC
ATGTTACCTA ACCATTCCCC GCTTATCATT GCCGAACAAT TTGGTACCTT GGCTGCACTT
TTCCCTGACA GGGTTGACTT AGGATTGGGA CGTGCACCAG GCACGGACAT GGCAACAGCA
AGAGCGTTAA GACGTAATAT GCAAGCCAGT GTGGAAGACT ACCCTAATGA TATTCGCGCC
CTGCAAGCTT ATTTAGGAAC ACCAAGTGCT GAGCAAGCGA TCCTCGCTAT TCCAGGTTGT
GACAGTCACG TGCCACTGTG GTTACTTGGT TCGAGTTTAT ACAGTGCCCA ATTAGCAGCA
CAATTTGGTT TGCCTTATTC ATTTGCGTCC CATTTCGCAC CAGATGCTTT ATTTGATGCA
TTGAATATAT ATCGCGGCCA GTTCAAACCG TCAGTGCAAT TAGATCAGCC TTACACGATG
GCAGGTGTGA TGGCTGTTAT TGCTGACACA GATGAAGAAG CACAATACTT ATATACCTCA
TTACAACAAC AATTTGCTAA TTTGCGCCGA GGGGCGAACA AGCCATTCGC AAGGCCAGTT
GATGAGATCA CTGCCGTGTG CAGCCCGGCG GAACTGTCAA TGATTGCTCA CACATTACAG
TATGCCATTG TTGGCTCTGC CGAGACTGCA CATTCCCAAT TAGCACGATT CATTGAGAAC
ACTAGGGTAG ATGAGGTGAT TTTTTCCTTT CCCATACATG ATCAAAACGC TCGTTTGCAC
AGTATGAAAT TGTTAGCAGA GAGTCAAAAT ATGGCGAAAG CCTAG
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| Protein sequence | MTGTTAFSIL DLAPIVQGQN ISQTLENSRQ MAVQAEQLGY NRVWLAEHHG MRGVGSSATS
VVLGHIGAAT RKIRIGSGGV MLPNHSPLII AEQFGTLAAL FPDRVDLGLG RAPGTDMATA
RALRRNMQAS VEDYPNDIRA LQAYLGTPSA EQAILAIPGC DSHVPLWLLG SSLYSAQLAA
QFGLPYSFAS HFAPDALFDA LNIYRGQFKP SVQLDQPYTM AGVMAVIADT DEEAQYLYTS
LQQQFANLRR GANKPFARPV DEITAVCSPA ELSMIAHTLQ YAIVGSAETA HSQLARFIEN
TRVDEVIFSF PIHDQNARLH SMKLLAESQN MAKA
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