| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1806 |
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| Symbol | |
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| ID | 4172054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2169917 |
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| End bp | 2171314 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054816 |
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| Product | L-sorbosone dehydrogenase |
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| Protein accession | YP_661381 |
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| Protein GI | 109898126 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.780322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCCTC TACGTACTTT TTTTGGCCCC TATTTATCTA ACTTTAAACA CTTTATACCT
GCCATTGGGA GCACAACGCT GATCGTTTCA CTCATTGGCT TAAGCGGTTG CAGCGAAAGC
TCTAAAATAG ACCCTGCTGT GACCTTTGGC GAAGAGCCCA CTTTGGTTGA ACCTAACAGC
ACACTTATCC CTAATGTGAG CATTGCCAGT GCTGTAGGCT GGCCTGAGGG CGAGAAACCT
ACGACCCCTT TGGATTCAAT CCAAGTGAAT CGCTTCGCAA TGGATTTAGA TCATCCAAGA
TGGCTTTACA CTTTGCCAAA CGGTGATGTT TTGGTGGCTG AGAGTAACAA GCCGCAGAAA
GACCAAGACG ATAGCGGAAT TAAGGACTGG ATTGCCGGCA AAATTATGGC AAAGGCTGGT
GCGGGCACTC CAAGTGCAGA TCGTATCACT TTATTAAGAG ACGCTGATAA GGACGGTGTG
GCGGAAACGA AAACCCGATT CTTGCAAAAC CTTCACTCTC CCTTTGGCAT GACACTCATC
GGCAATACCT TGTATGTTGC CAATACGGAT GCCGTGGTGA GTTTTCCTTA TCAGCAAGGC
CAAACTGAGA TCACAGCCGC AGGTACAGAG TTAATAAAAC TGCCTGGGGG GGAACTCAAT
CATCATTGGA CCAAAAACCT TATCGCCAAT AAGGACGGCA CTAAACTTTA TGCCTCGATT
GGCTCCAACA GTAATATTGC AGAAAATGGA TTTGAAGCCG AAATTGGCCG GGCCGCAATT
TGGGAAATCG ACATTGCAAC AGGTGAGCAT CGTGTTTTCG CTTCTGGATT ACGCAACCCC
GTAGGCATGA CTTGGGTCGA CGATACGTTA TGGACAGCAG TTAATGAGCG AGATGAGTTG
GGTAACGATT TAGTGCCTGA TTATATGACG TCAGTTCAAG AAAACGGGTT TTACGGTTGG
CCCTATAGTT ACTACGGGCA AAATATTGAT ACCCGAGTCG AGCAGCGAGA GCCTGAGTTA
GTAGCGCGCG CCATTAAACC CGATTATGCA TTAGGCGCTC ACACCGCATC GCTAGGGTTA
ATGTACTCTC GAGGTGGGCA TGCACTAAAC GATGTAAGCG AAGGCATGTT CATCGGCCAG
CATGGCTCTT GGAACCGTGA ACCTAAAGCT GGTTATAAAG TCATTTTTGT ACCTTTTAAA
AATCAACAAC CTGCGGGGAA ACCTATTGAT ATTCTGACAG GATTTTTAAA CCAAGAAGAT
GAAGCCCGAG GCCGCCCTGT CGGGGTTGAG TTTGATAAGA GCGGCAATTT ATTAGTGGCA
GATGATGTAG GCAATATAAT ATGGCGGGTA TCACCTAGTG ATAGCAATGT TACTCATAAT
CTAAGTTCTA GCGAGTAA
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| Protein sequence | MYPLRTFFGP YLSNFKHFIP AIGSTTLIVS LIGLSGCSES SKIDPAVTFG EEPTLVEPNS
TLIPNVSIAS AVGWPEGEKP TTPLDSIQVN RFAMDLDHPR WLYTLPNGDV LVAESNKPQK
DQDDSGIKDW IAGKIMAKAG AGTPSADRIT LLRDADKDGV AETKTRFLQN LHSPFGMTLI
GNTLYVANTD AVVSFPYQQG QTEITAAGTE LIKLPGGELN HHWTKNLIAN KDGTKLYASI
GSNSNIAENG FEAEIGRAAI WEIDIATGEH RVFASGLRNP VGMTWVDDTL WTAVNERDEL
GNDLVPDYMT SVQENGFYGW PYSYYGQNID TRVEQREPEL VARAIKPDYA LGAHTASLGL
MYSRGGHALN DVSEGMFIGQ HGSWNREPKA GYKVIFVPFK NQQPAGKPID ILTGFLNQED
EARGRPVGVE FDKSGNLLVA DDVGNIIWRV SPSDSNVTHN LSSSE
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