Gene Patl_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1804 
Symbol 
ID4172052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2167608 
End bp2169029 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content49% 
IMG OID638054814 
ProductFAD linked oxidase-like 
Protein accessionYP_661379 
Protein GI109898124 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTC ATATTATGGG CCTTGATGGC CAAAAAAAGG ATATAAATAC ACAACAGTTT 
GAACAGTACA CTTCCTCTAT TCGCGGTGAG GTGTTACTAC CTGACACTGC CGGTTACGCA
GAGGCTCGTG CACTATGGAA TGGCATGATA GACATCTGCC CCGCCCTCAT CGTCCGCTGC
AGTGGAACCG CAGATGTGGT AACAACCATA CAATTCGCTC GAAAGAATGA ACTGTTAATC
TCATTGAAAG GCGGTGGCCA CAATATTGCG GGCAGCGCGT TATGTGATGG CGGCCTAACG
ATAGATATGA GCTGTATGAA AGGCATCTCC GTTGATCCTA CGGCGCGCAT AGCAAGAGTG
CAAAGCGGCG TTTGCTTGGG AGATATTGAT CACGAGACTC AACGCTTCGG TCTGGCAGTC
CCGACTGGTA TTAATTCAAC AACGGGGATT GCAGGTCTGG CGTTGGGTGG CGGATATGGT
TGGTTAAGCC GAGCTTTTGG GCATACCGTT GATAATATTA TTAGCGTTGA TCTAGTTGAT
GCTCAGGGCG ATTTTCTGCA TGTATCAGAG CAGGAAAACA GCGAACTATT TTGGGCTATA
CGTGGCGGCA GCGGTAATTT TGGGGTAGTA ACACAATTTG AATTGAAATT GCATCCTGTT
GGACCGATGG TATTTGGCGG TCCGGCTGTA TTTCCCCTTA CCGAAGCGAA ATCAATTCTA
CGCACATATC GCGACATCGC CAAATCAATG CCGGATGAAG CAAGTTGCTG GCCTGTCATG
CGCAAAGCAC CGCCCTTTCC CTTTCTGGCC CCCGAACATC ACGGTGAGCC CGTCATTATT
CTGCCGATGA TATACGTGGG AGATATAGCA AAAGGTGAAG AGGCACTCGC CCCACTTCGC
AGTATTGCAA AGCCTTTAGC AGATGCGGTT GGCCCAGTCC CTTACGCTGC GTGGCAAGCA
GCATTCGATC CACTGCTTGC ACCAGGGGCG CGAAATTATT GGAAATCTAG CGACTTTACC
GAAATGACTG ACGAGCTTAT CGATACGTTA GTCAACGCAG CCGAACAGTT ACCATCAGAT
GAATGTGAAA TTTTTACGGC TCAGCTAGGC GGCGCTGCAT CTCGAGTGGC GCCTGATGCC
ATGGCCTTTC CCCATCGCTC AACAGCGTAC ACGGTAAATA TTCATGGGCG TTGGCAAACC
ACTGATGGGG ACGACGCAGG TAAAGCCTGG GTTAGAGAAC TGTTTAATCA ACTTGAGACG
TTCTCAACGG GCAGCGTATA CGTCAATTTT GTGCCCGAAT ATGACGAAGA GCGCTCAATT
GGCCCTTATG GTGCTAACAG GCCAAAATTA GAAGAAATTA AAAGTCGTGT TGATAAACTA
AACTTGTTTC GCAGTAATAT TAACATTCAG CCCAGAGCCT AA
 
Protein sequence
MNIHIMGLDG QKKDINTQQF EQYTSSIRGE VLLPDTAGYA EARALWNGMI DICPALIVRC 
SGTADVVTTI QFARKNELLI SLKGGGHNIA GSALCDGGLT IDMSCMKGIS VDPTARIARV
QSGVCLGDID HETQRFGLAV PTGINSTTGI AGLALGGGYG WLSRAFGHTV DNIISVDLVD
AQGDFLHVSE QENSELFWAI RGGSGNFGVV TQFELKLHPV GPMVFGGPAV FPLTEAKSIL
RTYRDIAKSM PDEASCWPVM RKAPPFPFLA PEHHGEPVII LPMIYVGDIA KGEEALAPLR
SIAKPLADAV GPVPYAAWQA AFDPLLAPGA RNYWKSSDFT EMTDELIDTL VNAAEQLPSD
ECEIFTAQLG GAASRVAPDA MAFPHRSTAY TVNIHGRWQT TDGDDAGKAW VRELFNQLET
FSTGSVYVNF VPEYDEERSI GPYGANRPKL EEIKSRVDKL NLFRSNINIQ PRA