| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1803 |
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| Symbol | |
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| ID | 4172051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2165345 |
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| End bp | 2167540 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054813 |
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| Product | peptidase S9, prolyl oligopeptidase active site region |
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| Protein accession | YP_661378 |
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| Protein GI | 109898123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.184836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTTCC TTTCAAAACA ACACTATATA CCTCGCGTTA TGGGCTATAT TCATATTGCT
AAACACAGGG ACAAAGAGTT TATTCGTGCG GTTTTGGCCC CTACTCAAAG CCAACATAAA
GGGAATCGAA TGAAAATTTC ATTGTTTTAC GCTTTAACAT TGAGCGCATT GCTGACATTG
ATCGGCTGCA CCAACAGCAT AAATCAGACA AGCCAGAAAA TATCTAATCC AGGTGCTCAA
CAAGCCTCTG CCCCAGCGCT CATTTCTCGG GAGGTTTTAT TTGGTAACCC CACTCGCTAT
CAAGGTCGCA TCAGCCCAGA TGGTAATAAG ATGAGTTTTA GAGCGCCAGT TGATGGCGTG
ATGAACCTAT GGGTGGGCAA CTTAGGGGAC TTCAACAGTG CAGTGCCAAT AACGCATGAC
ACCGGTCGTG GGATCCCTAC CCACTTTTGG TCACTCGACA GTCAATACGT GTTTTTCATC
CAAGACAAAG ATGGAGATGA GAACTGGCAT TTACACCGGA TTGATATCGC CAGTGGCAAC
ATCAGAGATT TAACCCCCTA TGCGGGTGTG CAAGCCGATC AAATGCACCA AAATGTAAAT
CACCCCGGTA CTATCATAGT AGGTATGAAC GATCGCGATG CCAAGTGGCA CGATGTATAT
CAAGTCAATG TAGCCACAGG GGAGCGCACA TTACTGGAGC AAAATAACGG CTATACCAAA
TATACGTTAG ACAATAACTT GCAGGTCCGC CTAGCAGTGA AAACCGCACC AGATAGGTCG
AGCCAAGTGT TTACTAAAAT AAAAGATAAA TGGCGTTTGT GGTTCGAGGT ACCCTTTTTA
GATTCTGAAC CCTTTAACAT TATTGGCTTT GATAAAGATA ATCAGGGCAT ATATATGCTC
GATACGCGAG AGCGAAACAC GGCTGCACTC GTTTATCTAC TTTTGGGTGA GACCACTCCT
AAGGTCATCG CCAGTGATAA CAAAGTAGAT GTATCAAATG TGCTGTTGCA CCCAAGCAGT
CACGAACCCT TAGCGTATGC ATTGAATTAC ATTCAACCTG TATGGCACGC AATTGGCAGT
ACACTCCAAA CACCCATCAA ACGGTTGAAC AGCCAACTTA GTGGCGGCTC TCAGGTGTTA
GCCCAAACGT TGGACAATTC CCTGTGGACT GTATTCACTG ACCAAAGCAA TCAATCCCCC
ATTTATAAGG TATTTGATAC CACAAGCGGC GAATTAAACA ATATGTTTGT GACGCAGCCA
AAGGTTAACG ACCTGCCTCT TTCTACCATG CATGGTGTAG TTATCCCTTC ACGTGATGAC
CTTGAATTGG TTAGTTACTT GTCGCTACCT TTGGATGCAG ATCTCGACCA AGATGGTAAA
CCGGAGCGTC CGTCTCCGCT GGTTTTATTG GTTCATGGCG GCCCATGGGC ACGGGATGTA
TTCGGCTTTG ATTCTACTGC GCAGTGGTTA ACGAATCGAG GTTACAGTGT GTTACAGGTT
AACTTTCGCG CCTCTACAGG ATTTGGCAAG GACTTTTTCA ATGCTGGAAA TAAAGAATGG
GCCGGTGCTA TGCATAACGA TCTTATCGAT GCAAAGAAGT GGGCCATTGA GCAAGGCATT
ACTACAGATG ACCGAGTCGC CATTATGGGT GGCAGTTATG GTGGCTATGC AACCTTAACC
GGACTGACTT TTACCCCTGA AGCGTTTGCA TGTGGAGTCG ATATTGTCGG TCCATCAAAC
CTAGTCACCT TACTCGATTC AATCCCGCCT TACTGGGAGA GCTTTCGTCA GAAGTTCTAC
GAAGCCGTGG GCGACCCTAC AACCGAAGAA GGCTTAGCAC TGCTTAAAGC ACGATCACCT
ATTACACATG TGGACAAAAT CGTTAAGCCG TTACTCATAG GGCAAGGTGC TAACGACCCA
CGTGTAAAAC AAGCTGAGTC CGACCAAATC GTTAATGCGA TGAAAAATCG TGACATCCCA
GTGACCTATG TACTCTACCC AGACGAAGGG CATGGCTTTA GTAAACCAGA AAACAATCTG
TCATTTTTCG CTGTAGCAGA AGCATTTTTG GGTTCTTGTT TAGGCGGGCG AATAGAGCCC
ATAGGTGATG ATTTCAGTAA TTCCAGCATT GAGATGATTC ATGGAAGCGA ATTTATCTCA
GGATTAGATG AGCATATGTC TGAGTCGGAA GAATAG
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| Protein sequence | MFFLSKQHYI PRVMGYIHIA KHRDKEFIRA VLAPTQSQHK GNRMKISLFY ALTLSALLTL
IGCTNSINQT SQKISNPGAQ QASAPALISR EVLFGNPTRY QGRISPDGNK MSFRAPVDGV
MNLWVGNLGD FNSAVPITHD TGRGIPTHFW SLDSQYVFFI QDKDGDENWH LHRIDIASGN
IRDLTPYAGV QADQMHQNVN HPGTIIVGMN DRDAKWHDVY QVNVATGERT LLEQNNGYTK
YTLDNNLQVR LAVKTAPDRS SQVFTKIKDK WRLWFEVPFL DSEPFNIIGF DKDNQGIYML
DTRERNTAAL VYLLLGETTP KVIASDNKVD VSNVLLHPSS HEPLAYALNY IQPVWHAIGS
TLQTPIKRLN SQLSGGSQVL AQTLDNSLWT VFTDQSNQSP IYKVFDTTSG ELNNMFVTQP
KVNDLPLSTM HGVVIPSRDD LELVSYLSLP LDADLDQDGK PERPSPLVLL VHGGPWARDV
FGFDSTAQWL TNRGYSVLQV NFRASTGFGK DFFNAGNKEW AGAMHNDLID AKKWAIEQGI
TTDDRVAIMG GSYGGYATLT GLTFTPEAFA CGVDIVGPSN LVTLLDSIPP YWESFRQKFY
EAVGDPTTEE GLALLKARSP ITHVDKIVKP LLIGQGANDP RVKQAESDQI VNAMKNRDIP
VTYVLYPDEG HGFSKPENNL SFFAVAEAFL GSCLGGRIEP IGDDFSNSSI EMIHGSEFIS
GLDEHMSESE E
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