| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1798 |
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| Symbol | |
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| ID | 4172046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2157456 |
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| End bp | 2158166 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054808 |
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| Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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| Protein accession | YP_661373 |
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| Protein GI | 109898118 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0325296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAT CATTTTCTGT TTATCGCTAT AACCCAGATG TAGACAATGC TCCTCGTATG
CAAGACTACA AACTTGAGGT TGAAGAAGGT CAAGACATGA TGGTGCTTGA TGCACTTATC
GCGTTGAAAG AACAAGATCC AACGTTGTCA TTCCGTCGCT CATGCCGTGA AGGTGTTTGT
GGTTCTGACG GTGTAAACAT GAACGGTAAA AACGGTTTGG CGTGCATCAC GCCTTTGTCT
GCCCTTGGTA GCAAGAAAAT CGTTGTTCGC CCTTTGCCTG GTTTACCTGT GGTACGTGAC
TTAGTCGTTG ATATGACTCA GTTCTATACC CAGTACGAAA AAATCAAGCC GTTCTTGATT
AACGACAACA ATCAACCGCC AGCACGTGAG TTTTTACAAT CACCTGAAGA GCGCGAGAAG
TTAGATGGTT TGTACGAGTG TATCTTATGT GCTTGCTGTT CAACCTCTTG TCCTTCATTT
TGGTGGAACC CTGACAAGTT CATTGGTCCT GCGGGCTTAT TGCACGCTTA CCGTTTCTTA
GCTGATAGCC GTGATACCGC GACTGAACAA CGCTTGGGCG ATCTAGATGA CGCATTTAGT
GTGTTCCGTT GTCATGGGAT TATGAACTGC GTTAGCGTTT GTCCGAAAGG GTTAAACCCG
ACCAAAGCAA TTGGACACAT CAAGTCCATG CTGTTACAGC GGGCTGTTTA G
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| Protein sequence | MQLSFSVYRY NPDVDNAPRM QDYKLEVEEG QDMMVLDALI ALKEQDPTLS FRRSCREGVC
GSDGVNMNGK NGLACITPLS ALGSKKIVVR PLPGLPVVRD LVVDMTQFYT QYEKIKPFLI
NDNNQPPARE FLQSPEEREK LDGLYECILC ACCSTSCPSF WWNPDKFIGP AGLLHAYRFL
ADSRDTATEQ RLGDLDDAFS VFRCHGIMNC VSVCPKGLNP TKAIGHIKSM LLQRAV
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