| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1783 |
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| Symbol | |
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| ID | 4172031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2142057 |
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| End bp | 2142821 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054793 |
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| Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_661358 |
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| Protein GI | 109898103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.189725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTCA ACGTTATCAT TCCTGCACGT TACGCCTCCA CTCGATTTCC GGGCAAACCC
CTAGTCGAAA TCAATGGTAA GCCTATGGTG CAACATGTAT ATGATCGCGC TATTGAATCA
GGTGCGTCAA ATGTGATTGT AGCCACTGAC GATGCCCGCA TCGCAAAAGC GGTGAGTGAT
TTTGGGGGAA AATATTGCAT GACTGGGGCT CATCATGAGT CTGGTACTGA GAGATTGGCT
GAAGTGGTGG AAATGCAGGA CATGCTGTCT CAGGAAATTG TGGTTAACGT TCAAGGTGAT
GAGCCGTTTA TTCCTGCTGA GAACATACAA CAAGTGGCAG AAAACCTACA TCATCATCAA
CAAGCCGAAA TGGCCACTTT GGCGGTTAAA ATAGTCGATG TAGAAGAAGC ATTTAATCCT
AATGCCGTCA AAGTCGTGTT AGACAAGCAA GGTTATGCTA TGTATTTCAC GCGGGCAACA
ATACCTTATG ATCGGGCGCG CTTTTTGGAT GAAGATATCA TTGATGAAAT CGGTGATTAC
TACCTGCGCC ATGTGGGGAT TTATGCCTAT CGTGCGGGTT TTATAAAACA ATATGTGAAC
ATGTCACCGT CAGGATTAGA GCAAATCGAG TCATTAGAGC AATTGCGTGT GTTGTGGCAC
GGTGAGAAAA TTCATGTTGA TATCGCGCGT AAAACGCCGC CCGCAGGCAT TGATACTCCT
GAAGACTTGA AGCGTATTCT CGCCGACCCT TCCCTTAAAT TTTAG
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| Protein sequence | MNFNVIIPAR YASTRFPGKP LVEINGKPMV QHVYDRAIES GASNVIVATD DARIAKAVSD
FGGKYCMTGA HHESGTERLA EVVEMQDMLS QEIVVNVQGD EPFIPAENIQ QVAENLHHHQ
QAEMATLAVK IVDVEEAFNP NAVKVVLDKQ GYAMYFTRAT IPYDRARFLD EDIIDEIGDY
YLRHVGIYAY RAGFIKQYVN MSPSGLEQIE SLEQLRVLWH GEKIHVDIAR KTPPAGIDTP
EDLKRILADP SLKF
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