Gene Patl_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1767 
Symbol 
ID4173696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2121393 
End bp2122112 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content42% 
IMG OID638054777 
Producthypothetical protein 
Protein accessionYP_661342 
Protein GI109898087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0819804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTGT TTTTATTGAT GATTGCAGCT CACATACTGG GTGATTTTTA TATTCAGAAA 
GATAGCTGGG TAACCTGTCG AAATAATCAT CATTTTGCCT CATGGGGGCT AGGTAAACAT 
GTACTGTCTC ATGTTGTTCT GCTCACTACT GCCATATGGT TGGCCGGCTT CTTAACTGCA 
CAAGGCTGGA TAGCCATTGT CGTGATAGGC TTTTCACATC TGCTTATCGA TGTATGGAAG 
TCTTATCAAC CAAACAAACT GAGCTACTTC TTATTAGACC AATTCTTTCA TATCGTGATC 
ATCGCTTTGG CTGCACTAGC GCTTAGTGGT ATTGGCTTGG CCGAGATAAA AACACAGCTA 
TATTTGCTCC TAAAAGTGAA ATATGTAGCC ATAACGTGTG CCTATGTGAT TGCGTGTCGG 
CCGGTATCGA TAGCCATAAC AATCGCTCTG GATAATTACA CCGCACAATT AGCGGATAAA 
CAAACGGGTC TTGCATCTGC AGGGCGCTGG ATCGGCTATA TAGAAAGGTG CTTAATTATC 
TCGTTTGTGT TGATTGGCCA ATTTGCGGGT GTAGGCTTTT TGCTAGCAGC CAAAACGATT 
TTTCGATTTG GCGACTTAAC AAAAGAAAAA GACATGAAGC TAACTGAGTA CATGATGCTG 
GGCACCTTAT TAAGCTTCTC ATGTGCGTTA TTACTGGGCT GGTGGGTCAA TAGACTCTGA
 
Protein sequence
MVLFLLMIAA HILGDFYIQK DSWVTCRNNH HFASWGLGKH VLSHVVLLTT AIWLAGFLTA 
QGWIAIVVIG FSHLLIDVWK SYQPNKLSYF LLDQFFHIVI IALAALALSG IGLAEIKTQL 
YLLLKVKYVA ITCAYVIACR PVSIAITIAL DNYTAQLADK QTGLASAGRW IGYIERCLII 
SFVLIGQFAG VGFLLAAKTI FRFGDLTKEK DMKLTEYMML GTLLSFSCAL LLGWWVNRL