| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1747 |
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| Symbol | |
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| ID | 4173676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2089239 |
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| End bp | 2090642 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054757 |
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| Product | RNA-metabolising metallo-beta-lactamase |
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| Protein accession | YP_661322 |
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| Protein GI | 109898067 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTA TCTATTTTTG GGGTGCAGCG CAGGAAGTGA CTGGCTCGTG TCATTTAATT
GAGTCTGCAA GCTTCGGTAA AATCCTGCTC GATTGCGGTA TGCATCAAGG GGGGAGCTCA
ATTGATCGCA TTGGTGACGA AGGCTTTCCG TTCAACCCTG CATCCATTGA CGCAGTGCTG
TTATCCCATG CCCATCTCGA CCATAGCGGC ATGTTACCTA AACTCGTCCA TGATGGATTT
ACCGGCCCCA TATACTGCAC CTCAGAAACG GCGGATTTAC TGGTGGTAAT GTTGCAAGAC
TCGGTCAGCA TTTACATGGG TGACTTAGCC CGTGAAAACC GCCGGCTAGC CCGTAAAGGT
AAGCCTCTAC TTGAGCCTGA ATACTCAGAA GAAGATGTCA TGCAAGTCAT CGCTCAGTGC
GAGTCGCAAA GCTACAACAA GGCGCTTAAG CTTGCTGAGC AAACCACAGC GTGCTTTCAC
GATGCTGGAC ATATTCTCGG CTCAGCGATT ATCGAACTTA GCTTCGAAGA AAGAGGCGAG
CAGAAAAAAT TGGTCTTCTC TGGGGATTTA GGCAACAAAA GCGCCGTATT AATGAACGAC
CCATGCATAC TGACCAAAGC TGATATTGTA TTAATGGAAA GCACCTATGG CGATCGCAAT
CACAAGTCTA TCGATAATAC GGTATCTGAG CTTAAAACCA TTTTAAAGGA TACCGAAAAC
CGAGGCGGCA ATATTATGAT CCCTGCGTTT GCAGTAGGAC GTACCCAAGA AATACTGTTC
TACCTAGGTC AATTACACCA ACAAGGTTTA TTAGACAATT GGCAGGTTAT TCTCGACAGT
CCCATGGCAA TTGAAGTGAC GCGCGTTTAC GACAAGTGGT TTAGTGCGCT CGATAGTGAC
GAAATTGAAC AAGCCAGCCC TAACGCACAC TCCATATTAA AAGACTTCAT TCCGCGCTTG
TTTTTGTCCG TGGCACCGGA TGAGTCCATG ATGATCAATA AAATTAAAAA AGGGGCGCTA
ATTATTGCCG GCAGCGGCAT GTGTACCGGA GGACGGATAC GCCACCATTT CAAACAGCGC
ATTTGGGATT CACGCAACGC CATTATCTTT TGTGGATACC AAGCAAATGG CACGCTCGGT
AGGTTGCTGG TTGACGGCCT ACAGCATTTA AAATTGTTTG GTGATGATTA CGTGGTCAAA
GCACAAATAG AAACGCTGGG CGGCTTTTCT GCTCATGCAG GGCAAAATGA ACTCGTAGAA
TGGGTGAGCC ATTTTGAGAA CAACCCGAAA GTTGTGTTAG TGCACGGTGA GCCTAAAGCC
CAAGAAGCGT TAGCACAGAA ATTATGGGAA GATAAAAACA TCAGAGCCGT GATCCCCAGT
TTGGGCCAAA GCTTGGTGTT TTGA
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| Protein sequence | MAIIYFWGAA QEVTGSCHLI ESASFGKILL DCGMHQGGSS IDRIGDEGFP FNPASIDAVL
LSHAHLDHSG MLPKLVHDGF TGPIYCTSET ADLLVVMLQD SVSIYMGDLA RENRRLARKG
KPLLEPEYSE EDVMQVIAQC ESQSYNKALK LAEQTTACFH DAGHILGSAI IELSFEERGE
QKKLVFSGDL GNKSAVLMND PCILTKADIV LMESTYGDRN HKSIDNTVSE LKTILKDTEN
RGGNIMIPAF AVGRTQEILF YLGQLHQQGL LDNWQVILDS PMAIEVTRVY DKWFSALDSD
EIEQASPNAH SILKDFIPRL FLSVAPDESM MINKIKKGAL IIAGSGMCTG GRIRHHFKQR
IWDSRNAIIF CGYQANGTLG RLLVDGLQHL KLFGDDYVVK AQIETLGGFS AHAGQNELVE
WVSHFENNPK VVLVHGEPKA QEALAQKLWE DKNIRAVIPS LGQSLVF
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