Gene Patl_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1726 
Symbol 
ID4171935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2066317 
End bp2066913 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content47% 
IMG OID638054736 
Producthypothetical protein 
Protein accessionYP_661301 
Protein GI109898046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGCA TTAGCCTCGA AGAAAAACAG CAACAATTCA ATGAATTTTT CACCATAGAG 
CATGCCATAC GGGTTAACTT TAAAGCCGTT GCGGCTGGCT TTACCTTGCC CGATGTCGAT
GACTTAGGGG AGCACATGCC CTACGCGTTT CGAGTGGCTA GTGAAGCAAC TGCCATTGAT
GCCCAAGCCT TACGCCCACT GCGTAACATG GGGGAACATG CTGTCGAGCT GGCCAACTTT
TTAAACGCGC AATCTCGCAA AATTGATTTG TTAATGTCCT TGGTATTGCA GCAACAAGAC
GACCCAAGCT TAGCTTACGA GTCAGTAAAG TTCGGCGGTG GCGGCATTAT CGTTAAGTGC
GATGAAGCCT ACGAGCCTGA GCAAATCGTT GAATTAAAAT TGTTTCTAAA GGAAGAGGCC
TCCGCCATTT TTTGCTATGG CGAAGTCATT GAGTGCCAGC AGGCAGGCGC GCAGTATCAT
GTGTCACTTA TTTATAACTG CATTCGTGAA GAAGATCAGG ATCTTCTGGT ACGTGCCAGT
TTACATCTTC AAACGGCGCA ATTACGCAAA CGCGCCAAGC AACAAAAGAA CGACTAA
 
Protein sequence
MHGISLEEKQ QQFNEFFTIE HAIRVNFKAV AAGFTLPDVD DLGEHMPYAF RVASEATAID 
AQALRPLRNM GEHAVELANF LNAQSRKIDL LMSLVLQQQD DPSLAYESVK FGGGGIIVKC
DEAYEPEQIV ELKLFLKEEA SAIFCYGEVI ECQQAGAQYH VSLIYNCIRE EDQDLLVRAS
LHLQTAQLRK RAKQQKND