| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1712 |
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| Symbol | |
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| ID | 4171921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2045922 |
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| End bp | 2047484 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054722 |
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| Product | ABC transporter related |
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| Protein accession | YP_661287 |
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| Protein GI | 109898032 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG GCGAAAAGCC ATTATTTGAA AATGTATCAG TTAAATTTGG TAACGGAAAT
CGTTACGGCT TAATCGGCGC AAATGGCTGT GGTAAATCAA CCTTTATGAA GATACTTGGG
GGAGACTTAG AGCAATCTGC CGGGAACGTT TCAACCGACC CAGGTGAGCG TATCGGTAAA
TTGAAGCAAG ACCAGTTCGC ATACGAAGAG TACAGTGTTA TTGATACTGT AGTGATGGGA
CACAATGAAC TGTGGAAAGT CAAAGCAGAG CGTGATGCTA TTTATGCTAA CCCTGAAATG
ACGGAAGAAG ACGGTATTCG CGTTGCCGAT TTAGAATCAG AGTTCGCTGA AATGGATGGC
TACACCGCAG AAGCACGTGC CGGCGAGTTA TTAATTGGTG TGGGTATTCC GGTAGAGCAA
CACTATGGCC CAATGAGTGA GATAGCACCA GGTTGGAAAC TTCGCGTACT GCTTGCTCAA
GTAATCTTTT CAGATCCAGA TATCATGCTA CTTGATGAGC CTACCAACAA CTTGGACATT
AACACCATTC GTTGGCTAGA AGGCGTGCTA AACGAGCGTA ATTGCTCCAT GATCATCATC
TCGCACGATC GCCATTTTTT AAACAGTGTG TGCACCCATA TGGCCGATTT GGATTATGGC
GAAATTCGCT TATTCCCTGG TAACTATGAT GAGTATATGA CCGCCTCTAC TCAAGCCAGA
GAACGCTTAG TATCAGATAA CGCTAAGAAA AAAGCGCAGA TCGCTGAACT GCGTACCTTT
GTTAGCCGCT TCTCGGCGAA TGCATCTAAG TCTAAGCAAG CTACGTCTCG CGCTAAGCAG
ATAGACAAGA TCAAACTGGA TGACATTAAA CCTTCAAGTC GTCAGACCCC TTTCATTCGC
TTCGAGCAAA CGAAAAAGTT ACACCGTAAC GCATTAGAGT TAACGGGATT GAAGAAATCC
TATGAAAAGG AGTTGTTCAA CGGTTTAGAC TTGATGGTTG AAGTTGGCGA ACGTATCGCA
GTTATCGGCG AAAATGGTTT GGGTAAAACC ACCCTGTTGA AGTGTTTAGT CGGAGATACT
GATTTAACAG CAGGCGAAGT CAAATGGTCC GAGAACTCGA ATATCGGTTA TTACGCCCAA
GATCATGCTC ATGAGTTCGA AAAAGAAATG ACGCTCATGG AATGGATGTA TCAGTGGGCT
CAAGAGGGTG ATGACGAGCA AGTCATGCGC GGTACATTAG GCCGCTTGCT TTTCTCTCAA
AATGAGATCA CCAAATCGGT GAAAGTCATA TCCGGCGGTG AACAAGGCCG TATGATGTTT
GGCAAATTGA TGCTTCAGCG CCCTAATATT TTGGTGATGG ATGAGCCGAC CAACCACATG
GACATGGAAT CGATTGAATC ATTAAACTTA GCGTTAGAAA ACTACGCGGG CACGCTGATA
TTCGTCAGTC ATGACCGAGA GTTTGTATCT TCAGTTGCTA CCCGCATCAT TGAAATAACA
CCAAATGGAA TTGTTGATTT CCGTGGTAAC TATGAAAGTT ATTTAGAAAG CTTAGGTGCT
TAA
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| Protein sequence | MQFGEKPLFE NVSVKFGNGN RYGLIGANGC GKSTFMKILG GDLEQSAGNV STDPGERIGK
LKQDQFAYEE YSVIDTVVMG HNELWKVKAE RDAIYANPEM TEEDGIRVAD LESEFAEMDG
YTAEARAGEL LIGVGIPVEQ HYGPMSEIAP GWKLRVLLAQ VIFSDPDIML LDEPTNNLDI
NTIRWLEGVL NERNCSMIII SHDRHFLNSV CTHMADLDYG EIRLFPGNYD EYMTASTQAR
ERLVSDNAKK KAQIAELRTF VSRFSANASK SKQATSRAKQ IDKIKLDDIK PSSRQTPFIR
FEQTKKLHRN ALELTGLKKS YEKELFNGLD LMVEVGERIA VIGENGLGKT TLLKCLVGDT
DLTAGEVKWS ENSNIGYYAQ DHAHEFEKEM TLMEWMYQWA QEGDDEQVMR GTLGRLLFSQ
NEITKSVKVI SGGEQGRMMF GKLMLQRPNI LVMDEPTNHM DMESIESLNL ALENYAGTLI
FVSHDREFVS SVATRIIEIT PNGIVDFRGN YESYLESLGA
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