| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1705 |
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| Symbol | |
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| ID | 4171914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2039060 |
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| End bp | 2040268 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054715 |
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| Product | PqiA family integral membrane protein |
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| Protein accession | YP_661280 |
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| Protein GI | 109898025 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATT ATCTTTCCAC ACTTGAGCGC TTTTTGGTAA CCTACAGATA TTGTAAATCA
AATGTGTCAC GTATGGACGA ATCGATAAAG ATTACAACGG CTTGTCAACA AGTTCAGTGT
CACGAATGTG GCTACTTGGT TGAAGTACCT CCCCTTGTAC ATCGCCAGCG CGCTCAATGT
CCTAGATGCC ATTATGTTAT CACAACCTAC TACCAGAATA TGGTTCAAAA GTTGGTAGCA
TTCTCGTTAG CGGCCTTAGT CCTTATGGTT GCTGCGCTAA GTTTTAATTT TTTATCGTTT
AGTGCAAACG GTCAATACCA TGCAATCAAT ATCTTCAGTA GCATTGAAAC TCTCGCAGAC
AATGATTATG TGGCCTTAGC GATTTTGCAA AGTGCCGTTA TTCTTGTGTT GCCGCTGACC
ATACTGTTTT GTTTACTGTA TTTACTAATC CCTGTGCTGT TTGGTAAAAA ACCGCAACAT
GCGGCCGTTT TACTCAAAAT TATCTTCGCG CTTCGCGCTT GGACCATGGT GGAAATTTTT
CTTGTCGCTG TGCTAGTAAG CTTGGTTAAA ATAATGTCTA TGGCAGATAT TGGTATCGGC
TTGTCTTTCT ATGCGTACGC GTTATTTGCT ATTTGTATGA CCTACACATT GATGTACATG
GACGAACATC AAATGTATCT CACCACATCA TGTGCGTTAC CCAAAATACA TAAACGGCAC
TCCCCATCTC ACAGCATTCA AGCGACGTGG GCATTACTAT TGACGTCGAT TTTACTCTAC
GTACCTGCGA ACACCTTGCC AATCATGCAT ACGGATATCT TAGGAGATGA TGAGCCCAGT
ACTATTCTTG GGGGCGTTAT AACGCTATGG AAAATGGGCT CATACCCGAT AGCCGCCGTC
ATTTTCATAG CCAGCATAGT GGTACCAGTG GCGAAACTGT GCATATTATG TTGGTTGAAT
TTCAGTGTGC AAACCCAATT CGCAGGCCGT AAAAAAACCC GTATGATCAG TTATCGATTT
ACTGAGTTTA TTGGTCGTTG GTCAATGATC GATGTCTTTG TTGTCGCGAT TTTGGTTAGC
CTGATCCAAC TAGGAAATAT CATGAGTATT TACCCTGGCT ATGCCGCCCT CGCATTCTGC
TCGGTGGTCA TTTTGACCAT GCTTGCGGCA ATGTCATTCG ATACGAAGTT AATTTGGAGC
GATCACTAA
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| Protein sequence | MRDYLSTLER FLVTYRYCKS NVSRMDESIK ITTACQQVQC HECGYLVEVP PLVHRQRAQC
PRCHYVITTY YQNMVQKLVA FSLAALVLMV AALSFNFLSF SANGQYHAIN IFSSIETLAD
NDYVALAILQ SAVILVLPLT ILFCLLYLLI PVLFGKKPQH AAVLLKIIFA LRAWTMVEIF
LVAVLVSLVK IMSMADIGIG LSFYAYALFA ICMTYTLMYM DEHQMYLTTS CALPKIHKRH
SPSHSIQATW ALLLTSILLY VPANTLPIMH TDILGDDEPS TILGGVITLW KMGSYPIAAV
IFIASIVVPV AKLCILCWLN FSVQTQFAGR KKTRMISYRF TEFIGRWSMI DVFVVAILVS
LIQLGNIMSI YPGYAALAFC SVVILTMLAA MSFDTKLIWS DH
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