| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1701 |
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| Symbol | |
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| ID | 4171910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2033843 |
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| End bp | 2035639 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054711 |
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| Product | ABC transporter related |
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| Protein accession | YP_661276 |
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| Protein GI | 109898021 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCTA AACAACACAC ACAAATTGAC GATGTCCCCT TTAATTGGCG CGTAGTAAAA
CAGCTATGGC CTTATTTATT GGAATTCAAG CGCCGCGTTT TCATCGCAAT GCTCTGCCTT
ATCGCAGCAA AGATCGCCAG TATCGGCCTG CCTTTTGTCT TAAAACACGC CGTTGACACT
CTAAACACGC CAGATGCAGA AAACGCCTTG GTGCTTGTTC CTTTTGCGCT CATTGCCGCC
TATGGGCTGC TGCGCTTAGC CAATGTCTTG TTTGGGGAGA TACGTGACAC GCTTTTTGGA
CGTGTGACTG AACGCGCTAT GCGCCGTATT AGCCTACAAG TATTTGAACA TCTGCACAGA
CTAGATCTCG ACTATCATTT AAATCGCCAA ACGGGGGGAT TGTCTCGCGA CATTGAGCGT
GGCACCAGTG GCATAAGTTT TCTGATGCGC TTCTTAGTCT TTAATATTGT CCCTACCCTG
CTGGAAATAC TGGCTGTTGT CGGTGTGCTT TTTTACAACT ATGGCTGGAG CTTCGCGGCG
ATTATTTTGG TCTCAGTTAT TGGTTACATC GGCTTCTCTG TAAGAGCAAC GCACTGGAGA
ACCGAGTTTG TGCGAGCGGT CAATCAAGCC GATTCGCTAA GTAATACCAG AGCGATTGAT
AGCCTACTGA ATTACGAAAC AGTTAAATAT TTCAATAACG AAGATTATGA GGCTAAGCGC
TACGATGTTG CCTTAGCGGA CTGGGAAACG GCACGGCGTA AAAACAGATT ATCTCTTTTT
GCCCTAAATG GCGGTCAAGC CACCATTATT GCTATTGCCA TGACCAGCAT GATGGCCGTT
GCTGCATATT ATGTTGCACA AGGCACCATG ACCATTGGTG ACTTTGTTTT GGTTAACGCC
TTTACCATGC AAATTTTCAT GCCTCTGAAC TTCCTTGGTT TTGTATATCG CGAGATAAGA
GGAGCATTAG CAAACATCGA GAATCTTTTT ACCTTACTCA GTAAATCTCC AAAAGTGATC
GACAATCAAG ATGCCAAACC GTTAGTCGTC AGCAAAGGCA ATGTACGTTT TGAAAACGTA
AGTTTCGGCT ACGGACCTGA CAGACAAATT TTGCACGGTG TGAGCTTTCG CGTACCTGCG
GGTAAAAAAG TAGCCATTGT TGGCCCAAGC GGCGCCGGTA AATCTACTAT TATTAAATTA
TTGTTTCGTT TTTATAATGC CAATAGCGGC GAAATTTATA TTGATGAGCA GCCTGTCAGC
CAATTGACAC AAGCCTCGTT ACGGCAAGCC ATCGGTATAG TGCCGCAAGA CACAGTGTTA
TTTAATGACA GTATTTTTGA GAATATCCGT TACGGTAACC CTTTGGCGAG TGATGAAGAG
GTTTACCAAG CCATCGACCA CGCACATCTA TCTGCATTCA TCAAAGCCCT ACCCCTAGGG
AAAGACACCA AAGTAGGCGA GCGGGGTCTT AAGTTATCGG GGGGCGAAAA ACAGCGCGTC
GCCATTGCTC GCACTATATT AAAAGGTGCT CCGATCCTAT TGTTTGATGA AGCAACTTCG
TCTCTGGACA GTCAATCTGA ACATGCGATT TTGAGTGCAT TTAGAGAGAT TGCAATCGGG
CATACCAGTA TTGTTATTGC CCATAGGCTC TCGACCATAG TCGATGCTGA CAGCATCATA
GTGATCCAAG ATGGCCGCGT GGTAGAACAA GGTAGTCATA CACTGCTTTT AGCCAATAAT
GGTCCGTATT ACCATCTGTG GAATACACAA CAAAAAGTGA ACTCAAAAGA TGCCTGA
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| Protein sequence | MRSKQHTQID DVPFNWRVVK QLWPYLLEFK RRVFIAMLCL IAAKIASIGL PFVLKHAVDT
LNTPDAENAL VLVPFALIAA YGLLRLANVL FGEIRDTLFG RVTERAMRRI SLQVFEHLHR
LDLDYHLNRQ TGGLSRDIER GTSGISFLMR FLVFNIVPTL LEILAVVGVL FYNYGWSFAA
IILVSVIGYI GFSVRATHWR TEFVRAVNQA DSLSNTRAID SLLNYETVKY FNNEDYEAKR
YDVALADWET ARRKNRLSLF ALNGGQATII AIAMTSMMAV AAYYVAQGTM TIGDFVLVNA
FTMQIFMPLN FLGFVYREIR GALANIENLF TLLSKSPKVI DNQDAKPLVV SKGNVRFENV
SFGYGPDRQI LHGVSFRVPA GKKVAIVGPS GAGKSTIIKL LFRFYNANSG EIYIDEQPVS
QLTQASLRQA IGIVPQDTVL FNDSIFENIR YGNPLASDEE VYQAIDHAHL SAFIKALPLG
KDTKVGERGL KLSGGEKQRV AIARTILKGA PILLFDEATS SLDSQSEHAI LSAFREIAIG
HTSIVIAHRL STIVDADSII VIQDGRVVEQ GSHTLLLANN GPYYHLWNTQ QKVNSKDA
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