Gene Patl_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1696 
Symbol 
ID4171904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2031311 
End bp2031727 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content44% 
IMG OID638054706 
Productribosome-binding factor A 
Protein accessionYP_661271 
Protein GI109898016 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAG AATTCTCTCG CACCGACCGC GTAGGTCAGC AAATCCATAA AGAGATCGCC 
AGTATTTTAC AGAATGAGTT CAAGAATCGT GACCCGCGTT TGGGCATGGT GACTGTGTCC 
GCTGTTGAAG TATCTCGCGA TTTAGCATAC ACAAAAATTT ACGTGACCTT TTTTGAGAAC 
GACGAAGAAG TCATGGACAA CTACTTGTCG ATCCTAGAAG AAAACAAAGG TTACATCCGC 
ACTTTACTGG CGAATCGCAT GCGTATGCGT GCTGTACCTG CGATTAAATT TGTTCGCGAT 
GGTTCATTAA GTGAAGGCAT TCGTATCAGC AATTTAGTAG ATGAAACGCT AAACAAAGAT 
AAAGAGCGCG CGCGCAATGC AGGCCGTTCT TTAGATGAAG ACGAACAAGA GGATTAA
 
Protein sequence
MAREFSRTDR VGQQIHKEIA SILQNEFKNR DPRLGMVTVS AVEVSRDLAY TKIYVTFFEN 
DEEVMDNYLS ILEENKGYIR TLLANRMRMR AVPAIKFVRD GSLSEGIRIS NLVDETLNKD 
KERARNAGRS LDEDEQED