| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1691 |
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| Symbol | |
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| ID | 4172282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2022973 |
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| End bp | 2025657 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054700 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_661266 |
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| Protein GI | 109898011 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAA ATACACGAGT CAGTGCTTTA GCCGCGGCCA TTTCCGCACA GTTTTTATTT
GCTACGCCTA CAGTATTAGC CCAAGAAGCT GATGTAGAGA AAAAAGAAGA CATCGAAATG
ATCATGGTGA CCGGTAGTTT CGTTCGCCGC AGTGAAAACT TTGAATCGCC GTCGCCATTG
TCCGTCGTGG ACAGCGTTGC AATTGACGCC CTTGGCGCGA AAAATATCGC TGATATTACC
CAAACGTTAA CCATTAACAC TGGGGCTGAA AATAACCCCG ACGCATTTAC GCAAAATGCG
ACAGCCGGTA CGTCAAATAT TAACCTTCGT GGTCTAGGTG TGGCATCGAC GTTGGTTTTG
CTAAACAATA AACGTCAAGT GGTTAACGCC CAACCGACCA ACAATGGACT AAATTTCGTT
GATACTAGCT CACTCGTTCC TATGATTGCG ATTGACCGTG TGGAGATCAT TAAAGATGGT
GCATCTGCTT TATATGGTTC GGATGCTGTG GCCGGGGTAG TTAACTTTAT AACAAAACGC
AATTATGACG GCGTGAAACT TAGCGCGGAT TATCAAGACG GTGCTCATGG CAATAATAAA
GAGTATGTAT TGCAAGGGTT GTGGGGCACC AGTAGTGAGG ATAGCAGCAT TATCGCTGCG
GTAAGTTACA CCAATCGTTC CCCTTTATTT ATAAAAGACC GTCGTTTGAG CCGCCCCCAA
GATGACAGCA GTGCGTTAGG TAATCCAGGC TCGTACTTTA TTGGTGCTAC ACCCTTTATT
GACCCCTATG GGTGTGAAGA GTTTGGTGGT GCATCCAATG TGTTAGCGCC TCCTGGCACT
GTGCCTGGCC TAGATGTAGG CCTTTGTATG TTTGATTTCG GTAAAGATTA TTCATACGTA
CCAGATGAAT CTCGTCTCAA CGCTTATGTG AAAGCAGAAT ATGAATTGAC GGACGAAATG
AGTTGGACCA CAGAAGTTAG CTTTGCGCGT AACCGTGCAT CTCGTGGTGG CGCACCAAGT
TTCCCAATTC TTACTGGGCC CGTTGTGCCT GCTGATCATC CTGAAAACCC GTTTGGACAA
GCTGTGACCT TTTTCGGCCG TGCTGAAGGT AACGGTAAAG CACCTGATTT CGCTAATACT
GAATCCGATA CATTTCGTTT TAACACCGCG CTGCAGGGTG AGCTAGAGCA TGGTTTTTGG
GAAGTCAGTT ACACCAATGC TACCAACGAC TTTTTCTTCA GTGTACCGGA TGTGTTGAAC
ACCGAGTTCA ACTTAGCGTT GAACGGTTTG GGCGGCGGAC AATGTAATCC GTTAACGGGT
ACTCCCGGGG AAGGGGATTG CGAATACTTC AATCCTTTCG CGACATCGTA CACAACTGCA
CCCAACTCTC AGTACGTAAT TGATTCATTT ACGGGTCTTG AAACCATCGA TTCAAAAGCT
GATTTACAAG TATTTGAAGG CTTTATGTCA TTCGATGTGT TTGATATGGA TGGCGGAGCG
GCAGGTCTCG CATTTGGTAT GCAATACCGT GATGAATCCT TGAGCCAAGA TTACGATGCA
CTGGCTAATC AAGACAGCTT TACGTTTGTA ATTGGTAACC CTGACTTTGA CGGCTCATTA
GATGTGTGGG CTGCGTTTGC TGAGATGGCA CTACCGGTAA CTGACGATCT AGATATTCAG
CTCGCTGTGC GTTACGAAGA TTACGGCGGC ACCATTGGTG ATACGATTGA CCCTAAAGTG
GCATTTTCAT ATCGCGCCAG TGAACAATTG TCTTTACGAG GTTCAATATC AACATCGTTC
AGAGCGCCAA CGGTATTTTT AAGAAATGGT GGCGGCACCT CACTACAACA ACTCGTTGAC
CCGCTTATCG GTGCAAATGC ATTCGCTGCA GTGCGTACTG TAGGGAATGA AGACTTAAAA
CCTGAAGAAT CTACCGCATA CAACCTTGGT GTGTCGTTCG AGCCGATTAG CGACTTTTCT
ATTGAAGTGG ATTACTGGAA CTTCGAGTTT GAGGATTTGA TTATTCAAGA AAATCCGCAG
GCTGTATTAA ACTTAGACCC AAGCGATCCT GAGCGTGTTG TTCGTGCAGG TGACCCACTA
ACCGGCCCGT TAACACAAGT TAACAATACT TATGTTAATG CAAGCTCTCT TGAAACCTCT
GGTCTAGACT TTGTGACCAG TTATAAGATT GATACGGACG CTGGTATGTT TGTGCCGTCA
ATCAATGCTA CTTACATTCT GGAATATGAA CTAAACGACC CGCAAGCAGG TAAAGTCGAT
GGGGCAGGGC GCAGAAACTT TACAAATATA GGTACTTCTT CTCCTGAGCT ACGTTTAAAT
CTTGGGCTAA ATTGGTCCTC GGGTGCTCAT TCTGCCAATA TCTTTGCCCG TTATATTGAC
AGTTATGATG ACGACCAAAA CTGTGCTGAT GGCAGCGTCA ATACAGGTTC ATGTGAAGGA
TTAGGAGGGT TTAAAGGAGT TGATAGCCAA GTGACCTACG ATGTTCAGTA CAACGTTAAT
TTGGGTACTT TGTTCGATAC CCAGAACAAC TATGTATTGT CTGTGGGTGG TATCAACATC
ACAGATGAAG AGCCGCCACA GTTATTCACT AACAGTGGCT TTGACAGTAA GGTGCATGAC
CCAAGAGGGC GTCAAATATA CGCGCGCTTC GCCGTCGAAT TCTAA
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| Protein sequence | MKINTRVSAL AAAISAQFLF ATPTVLAQEA DVEKKEDIEM IMVTGSFVRR SENFESPSPL
SVVDSVAIDA LGAKNIADIT QTLTINTGAE NNPDAFTQNA TAGTSNINLR GLGVASTLVL
LNNKRQVVNA QPTNNGLNFV DTSSLVPMIA IDRVEIIKDG ASALYGSDAV AGVVNFITKR
NYDGVKLSAD YQDGAHGNNK EYVLQGLWGT SSEDSSIIAA VSYTNRSPLF IKDRRLSRPQ
DDSSALGNPG SYFIGATPFI DPYGCEEFGG ASNVLAPPGT VPGLDVGLCM FDFGKDYSYV
PDESRLNAYV KAEYELTDEM SWTTEVSFAR NRASRGGAPS FPILTGPVVP ADHPENPFGQ
AVTFFGRAEG NGKAPDFANT ESDTFRFNTA LQGELEHGFW EVSYTNATND FFFSVPDVLN
TEFNLALNGL GGGQCNPLTG TPGEGDCEYF NPFATSYTTA PNSQYVIDSF TGLETIDSKA
DLQVFEGFMS FDVFDMDGGA AGLAFGMQYR DESLSQDYDA LANQDSFTFV IGNPDFDGSL
DVWAAFAEMA LPVTDDLDIQ LAVRYEDYGG TIGDTIDPKV AFSYRASEQL SLRGSISTSF
RAPTVFLRNG GGTSLQQLVD PLIGANAFAA VRTVGNEDLK PEESTAYNLG VSFEPISDFS
IEVDYWNFEF EDLIIQENPQ AVLNLDPSDP ERVVRAGDPL TGPLTQVNNT YVNASSLETS
GLDFVTSYKI DTDAGMFVPS INATYILEYE LNDPQAGKVD GAGRRNFTNI GTSSPELRLN
LGLNWSSGAH SANIFARYID SYDDDQNCAD GSVNTGSCEG LGGFKGVDSQ VTYDVQYNVN
LGTLFDTQNN YVLSVGGINI TDEEPPQLFT NSGFDSKVHD PRGRQIYARF AVEF
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