| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1688 |
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| Symbol | |
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| ID | 4172279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2018626 |
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| End bp | 2020881 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054697 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_661263 |
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| Protein GI | 109898008 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.132368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTA GAACAAACCT TAAAAAAGTA TTACCTGCAA TTTCTTTAAC AGAGCAAGAA
GCGTTAGACG CGGGTGATGT ATGGATTGAA TCATCCATCT ATCGTGGTAC GCCTGATATG
CAAGCCTTGC GTGCCATTCC TAAAGCGACT TTGAGCGCAG ATGAGCAAGC TTTCTTAGAC
GGTCCAGTAC AAGAGCTATT GGAAATGGTT GATGATCACG AACTGCAAAA CGGTCATCAT
TTACCGCAGA ATGTGTTGGA CTTTTTATCA GCAAATAAGT TTTTCGCTTT GATTATTCCC
AAGAGATTTG GTGGATTAGA GTTTTCTCCT TATGCTAATT CAACCATAGT CGCGACAATT
GCAGTAAAAA GCAGCGCGGT TGCGGTAACC GTCATGGTGC CTAACTCATT AGGACCGGGC
GAATTGCTAA TGCATTACGG TACTACAGAG CAACAAGACC ACTGGTTGCC CAATTTAGCT
GTAGGTAAAG ACATTCCATG TTTTGCACTG ACCAGCCCTG AGGCAGGCTC AGATGCGGGT
GCTATCCCTG ATACAGGGAT TGTGACCAAA GAAATGTACG AGGGCAAAGA AGTAATTGGC
TTATCGGTGA CTTGGGATAA GCGTTACATC ACGCTTGCGC CTATCGCTAC GGTACTTGGA
TTAGCCTTTA AAGTATTCGA CCCCGACCAT TTATTGGGTG ACAAAGTGGA GCTAGGCATC
ACGTGCGCGC TTATCCCTAA GTCACACCCT GGTGTTGAGC TAGGTAATCG TCACGATCCT
ATGGGTATTC GTTTCTATAA CGGCACCACT CGCGGTAACA AAGTATTCAT CCCAATGGAC
TTCATTATTG GGGGTCAGAA AAACATTGGT CGTGGATGGC AAATGCTTGT CAGTTGTTTG
GGTGCGGGAC GCGGTATCTC ACTTCCTGCA ATGGGTGTGG CATCAGCACA ATCTGCTCTG
AAGTCTACCG CAGAATATTC GTTTGTTCGT GAACAATTCG GCGTGCCAAT TGGGCGTTTC
GAAGGAATTC AGGAAAAACT TGCTGATATA GCGGGTAAAA CGTTTGTTTT AGAAGCCATG
CGTGTATTGA CCACTGAAGG CCTGGGTTTA GGCCTTAAGC CTTCGGTTGT AACGGCAATG
GCTAAATACC ACATGACTGA ATTAGGTCGT GATGTGTGTA ACACCGCGAT GGATATCCAA
GCCGGTAAAG CGATTCAACG AGGGCCGCAA AATACCTTAG CGAATGGTTA TGCAGCGCAA
CCCATTGCCA TTACGGTTGA AGGTGCAAAC ATTTTAACCA GAAGCTTAAT GATATTTGGT
CAAGGCGCAA TGCGCTGTCA TCCCCATATG AAAGAAATGG TTGATCTCAT TCACAGCGAT
GAAGCCTCAG CAGACAAAGA GTTTAATAAA GTGTTGGGTA AAACCATCAA CTTCAGTGTT
AAGAATTCGT TGCGCAGCTT CAGTAAAAGC TATTTAACCT TTACGCGCGG CGCGCAATCT
AGCTTGCCTG AAGTGAAGCC ATATGAAAAA CGCATGAACG CTTTATCAGC CAAACTAGCA
CCTCTTGCTG ATTTATCGCT ACTTGTCCTT GGCGGTGATT TGAAGAAAGC CGAAATGCTA
TCGGCACGTT TGGGTGATGT GATGAGTTAC TTATATGCCT CCATGGCGGT GGTTCGTTTT
TACGAGCAAC GGGTAACAAA CCGAGTTGAA GCCAAGCCTT ATTTCGAATA CGCCATTCAG
TGGTGTTTAT TGCAGGGTGA GCAGGCTTTG AATGAATTCG TCAGTAACTT CCCGAACACA
GCCACTCGTG GTTTGATGCG TGTATTAACT AACACTTATA CGCGCTCAGT TCCGGCCATA
TCTGACAAAC TAAAACGACA GCTTTCTGAT GCCACTATGG CGCAAAGCTC GATCATGGCA
GATTTAACCC ACTTGGTTAA GGTTATTCCT GGTGATGGTA ATCACATCAA CCAAGAAGCA
TTTGCTGCAA AGCACGATGT CATGCCTATC CTTAAAGTTG TGCAAAAAGC ACTCCGTAAG
GATCCAGTGG TCCCGTTTGT TTCCTTTGAA AATGCAGTGA CTAAGCTGCA TGAAAACGGT
GAACTAAGCG CAAACGAATA CGCTCGCGTA ATCGATTATA ATAATAAGCG ACAACTAGCC
GTGCGTGTTG ATGAGTACAC CTTTGATATG GAACTGCTTG ATGCAAATCA ACAGCTCGTC
AAAGGTGAAC CAGAAGCGCA CACAGACGCC GCGTAA
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| Protein sequence | MSIRTNLKKV LPAISLTEQE ALDAGDVWIE SSIYRGTPDM QALRAIPKAT LSADEQAFLD
GPVQELLEMV DDHELQNGHH LPQNVLDFLS ANKFFALIIP KRFGGLEFSP YANSTIVATI
AVKSSAVAVT VMVPNSLGPG ELLMHYGTTE QQDHWLPNLA VGKDIPCFAL TSPEAGSDAG
AIPDTGIVTK EMYEGKEVIG LSVTWDKRYI TLAPIATVLG LAFKVFDPDH LLGDKVELGI
TCALIPKSHP GVELGNRHDP MGIRFYNGTT RGNKVFIPMD FIIGGQKNIG RGWQMLVSCL
GAGRGISLPA MGVASAQSAL KSTAEYSFVR EQFGVPIGRF EGIQEKLADI AGKTFVLEAM
RVLTTEGLGL GLKPSVVTAM AKYHMTELGR DVCNTAMDIQ AGKAIQRGPQ NTLANGYAAQ
PIAITVEGAN ILTRSLMIFG QGAMRCHPHM KEMVDLIHSD EASADKEFNK VLGKTINFSV
KNSLRSFSKS YLTFTRGAQS SLPEVKPYEK RMNALSAKLA PLADLSLLVL GGDLKKAEML
SARLGDVMSY LYASMAVVRF YEQRVTNRVE AKPYFEYAIQ WCLLQGEQAL NEFVSNFPNT
ATRGLMRVLT NTYTRSVPAI SDKLKRQLSD ATMAQSSIMA DLTHLVKVIP GDGNHINQEA
FAAKHDVMPI LKVVQKALRK DPVVPFVSFE NAVTKLHENG ELSANEYARV IDYNNKRQLA
VRVDEYTFDM ELLDANQQLV KGEPEAHTDA A
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