| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1687 |
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| Symbol | |
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| ID | 4172278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2017199 |
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| End bp | 2018521 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054696 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_661262 |
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| Protein GI | 109898007 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAGAC GTCAGTTTTT ACATGCATTG GGGCTGGGCG CCGGAGCAGG TTTGGTGAGC
ATATCGTCTT TATTAAAAGC AGGACCAAAA GCAGTACCTA AGATAGCAAA CGCAAATAGT
TTTCCTGCAC CGAGTGATTG GCAAGCGTTG CGTAATTTGT TTCCATTGAC TCGGGACTAC
ATTCAGCTAT CAACATTCTT GTTAGCGTCG CATCCCGCAC CTGTTTCTCA AGCCATCGAA
AAGCACAGAC AAGCATTTGA TGAGAACCCT TCGGATTACT GGCATGAGCA CTTTCTCACT
ATTGACGGTG AAATAACCCA AGCCGCGGCT GATTATATGG GAGGAGAAGC TCGACACATC
GCGTTAACCG ACAGCACCAC TATGGGGTTA GGCTTGATTT ATAGTGGATT AAAATTGCAG
CAAGGGGACG AAATTCTGCA AACCGTGCAC GACCATTACT CCACTGATAT GTCGTTGGTG
CACCGGGCTA AACGCACTGG GGCCACGGTT AAGCGCATCG CTCTGTATGA CGAGCCAGCG
CAAGTCAACG TGGATCAGGT GTTAAAGCGA TTGCGCGATG CTATTAGCCA GCGAACAAAA
GTGGTTGCGG CTACGTGGGT GCATTCATCC ACTGGTGTAA AGCTGCCTAT TCGGGCTATG
GCTGATACCA TCATCAAGAT TAATCAGCAG CGTAAAGGTG ATCAACAGAT ACTGTTTTGC
ATTGATGGCG TTCACGGGTT TGGTATTGAG GATCAAGATA TTAGCCAGTT AGGGTGTGAC
TTTTTCGTCG CTGGCACTCA CAAATGGATA TTTGGCCCAA GGGGCACAGG TGTTGTGTGG
GGAAATGAAC GGGCGTGGGC TCAAAGCGAG CCGGTTATTC CTAGTTTCAG TGAGTCTTAC
AATGTTTGGC TAGGGTCAAC GACGCAAGAT AACGTGCCGA TTGGCGATCA TATGTCCCCT
GGGGGTTTTC ACTCCTTCGA GCATCGCTGG GCTTTGCCAG AAGCATTCAA ATTACACCTT
CAGTTGGGCA AAGCGAACGT TCAAAAGCGC ATTCATCAAC TTAATGCACA AACCAAGAAA
GGGTTAGCAG AAATGTCGCA TGTGACATTG TATACACCCC ATGACAGTGC ACTTTCATCT
GGCCTAGTGT GTTTCGACGT GAAGGGACTA GCGCCGCAAG CCGTAGTAGA AAAGATGCAT
GCTAAAGGTA TTATTATGAG TAGTACGCCT TATCGGCAAA GCTATGCGCG CTTCGCACCA
TCCTTGCTGA ACAACGAACA GGAAATAGAA TTGGCGCTGG CTGAAATTCG TGCCCTGGCG
TAG
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| Protein sequence | MLRRQFLHAL GLGAGAGLVS ISSLLKAGPK AVPKIANANS FPAPSDWQAL RNLFPLTRDY
IQLSTFLLAS HPAPVSQAIE KHRQAFDENP SDYWHEHFLT IDGEITQAAA DYMGGEARHI
ALTDSTTMGL GLIYSGLKLQ QGDEILQTVH DHYSTDMSLV HRAKRTGATV KRIALYDEPA
QVNVDQVLKR LRDAISQRTK VVAATWVHSS TGVKLPIRAM ADTIIKINQQ RKGDQQILFC
IDGVHGFGIE DQDISQLGCD FFVAGTHKWI FGPRGTGVVW GNERAWAQSE PVIPSFSESY
NVWLGSTTQD NVPIGDHMSP GGFHSFEHRW ALPEAFKLHL QLGKANVQKR IHQLNAQTKK
GLAEMSHVTL YTPHDSALSS GLVCFDVKGL APQAVVEKMH AKGIIMSSTP YRQSYARFAP
SLLNNEQEIE LALAEIRALA
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