| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1686 |
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| Symbol | |
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| ID | 4172277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2015721 |
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| End bp | 2016896 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054695 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_661261 |
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| Protein GI | 109898006 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA CCCGCGTTGA AATTTTTGAT ATCGAGTGCC CAAAACGCAC AGTGTGGAAC
CCCGTTTTTA TTCGTATTCA TACAGATGAA GGGATAACAG GCGTAGGGGA GGCTGGTCTT
GCATACGACT GGGGACACAG TGCTGCTGCG CATATGATTA AGGAAATTGC AGAAGCATTA
TTGATCGGTT TCAATCCGGT CAATACCGAA CTGCTGTGGA GCAAAATGCT CAGAGAAGGT
TTTTGGGGAC TAGGTGGCGG CCCAGTGTTT TATGCGGCTA TGAGCGCAAT CGATACGGCA
TTATGGGACA TTAAAGCCAG AGCGCTAAAT GTACCTTTGT ACCAATTATT GGGTGGTAAA
ACCAACGAAA AATTACGTAC TTATGCCAGC CAATTACAAT TCGATTGGGA TAAAGAGGTT
ACCCGCTTGA ACGACCCTGT TGATTACGGA CGCGCAGCTG AAAAAGCTGT GGCTGAAGGC
TATGACGCTG TTAAAGTTGA CCCGATTGTT TACGATAAAA ACGGGGCAGG GCACTTTGAT
CGCACCAAGT TGTTTACTCA GCCAGAAATG CGCTTGTTCA GAGCGCGGTT GCAAGCCATC
CGTGATGCGG TAGGTGACGA CGTAGATATT ATTTTTGAAT GCCACAGTTT ACCCGGTGTT
GCCACGGCCA TTCAGTTAGG TGAAATGGTC GAAGACATTG GTTGTTTGTA TTACGAAGAG
CCAGTGAACT ACTTGAATTC TAAATTACAC GATAAAGTCG CCAAGCGCGT GAATGTGCCC
ATTGCTGGTG GTGAGCGTTT ATATAATCGT TGGGGGGTTA GACCGTATCT AGAAGATCAA
AGCCTAGACG TATTGCAGCC CGACATTGGC TTATGCGGTG GTTTCACTGA AGCCAAAAAA
GTCTGTGATT ACGCTGATGT GTATGACGTA CGCATCCAGG CCCATGTGTG TGGTGGCCCC
GTGGCGACGG CGGCGAGCTT ACATTTAGAA ACTGCTATCC CTAACTTTTT GATTCACGAG
CATCATACTT ACGCCATTAA AGACTGGAAT CGCGAATTGT GTATTCAAGA CCCTCAGCCC
GTTAATGGCT TTTTCGAAGT CAGTGAAACC CCAGGCATTG GTATCGATCT CAACGATGAG
ATTGTTTACC GCTCGCCGCA TATGGAAGTG AAATAA
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| Protein sequence | MKITRVEIFD IECPKRTVWN PVFIRIHTDE GITGVGEAGL AYDWGHSAAA HMIKEIAEAL
LIGFNPVNTE LLWSKMLREG FWGLGGGPVF YAAMSAIDTA LWDIKARALN VPLYQLLGGK
TNEKLRTYAS QLQFDWDKEV TRLNDPVDYG RAAEKAVAEG YDAVKVDPIV YDKNGAGHFD
RTKLFTQPEM RLFRARLQAI RDAVGDDVDI IFECHSLPGV ATAIQLGEMV EDIGCLYYEE
PVNYLNSKLH DKVAKRVNVP IAGGERLYNR WGVRPYLEDQ SLDVLQPDIG LCGGFTEAKK
VCDYADVYDV RIQAHVCGGP VATAASLHLE TAIPNFLIHE HHTYAIKDWN RELCIQDPQP
VNGFFEVSET PGIGIDLNDE IVYRSPHMEV K
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