Gene Patl_1681 details

Gene Information

• Locus tag: Patl_1681
• ID: 4172272
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 2010852
• End bp: 2011472
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638054690
• Product: hypothetical protein
• Protein accession: YP_661256
• Protein GI: 109898001

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTAC CGATCATACT AGTTACAGTC ATATTGGCTA TTAGTCCAAG TATTGCACTG 
GCCAGTCAAA AAGAAGTTGA AGTTTTCTAT TTTGAGAATA TTGCGCAAAT GCGATATGAA 
AGTAGCCCAT CGGCACTGAC TGAAGCCAAG AAGAAGCTAA TGCGCCACTT ACCCTACAGT 
AACGATGGCC TATCGACACC AGAGGTTGAA AACCTAAGCC TTATTGGTAA CGACGTTAAA 
AGAAGCTTTC CTATGCAAAT GATGTCAGAT ATTCGCACTG TTCGTACAGA TGTTGAATTA 
CCCGAGAGTA GCGTTGTGTT GGGTTCGATT AACACAAACG ATGGCAACAT AGTGTTAAAC 
GGCGTAACCG TATTTGGTCA CATTAAGTCC CTGCAAGGAG ATATCAGTTT AACCGGTAAT 
ACCGTCGTTT TTGGTAACGT GTTTATTGGC CGGCAGATGT ATCAGATTAA TGGAAACGAG 
ATGGGGCCGC CCTCTGTGTT TATTGGCGAA GATGTTCGCA TAACAGGCAA GTTGATCGCA 
CATCCTTTGG TACAGCTAGC GATTGAAAAT GACCAAGCTA GCATAACCTA CAATGGTGCG 
TCGTTGAGTT CATCTTTATA G 

 

Protein sequence

MSLPIILVTV ILAISPSIAL ASQKEVEVFY FENIAQMRYE SSPSALTEAK KKLMRHLPYS 
NDGLSTPEVE NLSLIGNDVK RSFPMQMMSD IRTVRTDVEL PESSVVLGSI NTNDGNIVLN 
GVTVFGHIKS LQGDISLTGN TVVFGNVFIG RQMYQINGNE MGPPSVFIGE DVRITGKLIA 
HPLVQLAIEN DQASITYNGA SLSSSL