| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1676 |
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| Symbol | |
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| ID | 4172267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2002606 |
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| End bp | 2003301 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054686 |
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| Product | Pirin-like |
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| Protein accession | YP_661252 |
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| Protein GI | 109897997 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.192961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGATA TTCGTTTAGC AGCAACACGG GGGCATGCCA ACTTTGGATG GCTCGATAGC
CGTCATACTT TTTCATTTGG CTCCTATCAC GATCCAGAGC ACATGGGATA TTCGGCATTA
CGTGTGATCA ACGATGATAA AGTCGAACCG GGTGCTGGGT TTGGCACCCA TGGTCACAAA
GATATGGAGA TAATTAGCTT TGTAACTCAG GGCATTATTG CTCACAAAGA CAGCATGGGT
AATGTGAAGC ACTTGCCCCC AGGTGAATTT CAGCTTATGT CTGCCGGTAC TGGAGTGACT
CACAGTGAGT ATAATGCATC ACAAAGTGAG TCCTTGCGCT TTTTACAGAT TTGGATCATG
CCGAGTCGTC AGGGGGGGAC GCCTGGCTAC CAGCAAAAAG CCTTTGGTAG ACGCCAAGGC
CTGACGCCCA TTATCACCCC AACAGGTAAA AATGGCACGC TGGCGATTAA GCAAGATGCC
ACACTGAGTC AATTGGTGCT TGCTCCTGAG ACAAGCCTGA ACATCGAATT GGATAAAGCG
CGCAATACGT ACGTGCACCA AGTCAGCGGG CAGCTTGATA TTAACCAGCA TCGACTTAAT
CCAAGTGATG GCGCGAAAAT AAATGAACTC AACACTTTGG TTTTAGCTAA CAAAGGCACA
CAGAGTGTCA CTGCGTTGTT ATTTGATTTG CCTTAA
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| Protein sequence | MIDIRLAATR GHANFGWLDS RHTFSFGSYH DPEHMGYSAL RVINDDKVEP GAGFGTHGHK
DMEIISFVTQ GIIAHKDSMG NVKHLPPGEF QLMSAGTGVT HSEYNASQSE SLRFLQIWIM
PSRQGGTPGY QQKAFGRRQG LTPIITPTGK NGTLAIKQDA TLSQLVLAPE TSLNIELDKA
RNTYVHQVSG QLDINQHRLN PSDGAKINEL NTLVLANKGT QSVTALLFDL P
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