| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1670 |
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| Symbol | |
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| ID | 4172261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1996180 |
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| End bp | 1997556 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054680 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_661246 |
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| Protein GI | 109897991 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA ATTTAACAGA ACGCTTAGGC AAAACTCTCA AAGATATCAG CGGCCGTGGC
CGATTAACTG ATGACAACAT CAAAGACACC CTGCGCGAAG TACGCATGGC GCTTCTTGAG
GCCGATGTCG CCTTGCCAGT GGTAAAAAGC TTCATTGAGC AGGTGAAAGA GCGTGCTGTA
GGCACCGAAG TTTCAAAAAG TTTAAATCCC GGCCAGGTAT TCATCAAAAT TGTACAAGCT
GAGTTGGAAT CTGTCATGGG GCAGGCCAAT GAAGGCTTAG ACCTTGCCGC GCAGCCGCCA
GCAGTCGTAC TCATGGCAGG TCTGCAAGGT GCGGGTAAAA CCACCAGCGT GGGTAAACTA
GCGCGCTATT TAACCGACCG TGAAAAGAAA AAAGTACTTG TGGTCAGTGC TGACGTGTAT
CGTCCTGCGG CCATCAAGCA GCTTGAAACC CTAGCGATTG AAGTCGGTGT AGAGTGTTTC
CCGTCGACGA TAGAACAAAA GCCGATTGAT ATTGTTAATG CAGCAGTTGA TCACGCAAAG
AAAAAATTCT TTGATGTGTT ATTAGTCGAT ACTGCGGGGC GTTTACACAT AGACGCAGAA
ATGATGGGAG AGATTAAAGA CCTTCATCAA GCGATTAAAC CGATAGAGAC ATTGTTCGTG
GTGGACGCCA TGACCGGGCA AGATGCCGCG AACACGGCCA AAGCGTTTAA TGAAGCGTTG
CCATTAACCG GTGTTATCTT GACGAAGACA GACGGTGATG CCCGCGGTGG TGCTGCATTA
TCTGTTCGCC ATATCACTGG CAAGCCTATT AAATTCTTGG GTATGGGCGA AAAAATTGAC
GCCCTTGAAC CTTTCCACCC TGAGCGTGTT GCTTCACGTA TATTGGGTAT GGGTGATGTA
CTGAGCCTGA TTGAGGAAGT TGAGCGTAAA GTTGATAAAG ATAAAGCCCA ACGTCTTGCC
AAGAAAGTAC AGAAAGGCAA AGGTTTTGAC TTACAAGACT TCAAAGAGCA GTTGGAACAA
ATGCGTAATA TGGGCGGCAT GATGTCCATG ATGGATAAAC TACCCGGTAT GGGCAACATG
ACCGCTCAGG TGAAAGACAA GGCCAACGAT AAGTCATTTA ATCAAATGGA AGCGATCATT
AATTCAATGA CACCCCTTGA GCGTGCTAAG CCCGATACCA TCAAAGGCTC ACGCAAACGT
CGAATTGCTA TGGGGTCTGG TACTCAAATT CAAGACGTAA ACCGCCTGTT GAAGCAGTTT
ACCCAAATGC AAAAGATGAT GAAGAAAATG TCAGGCGGTG GCATGAAGAA AATGATGCGC
AACATGAAAG GTATGATGCC CCCTGGTGGT CCTGGTGGAA TGTTCCCACC ACGTTAA
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| Protein sequence | MFENLTERLG KTLKDISGRG RLTDDNIKDT LREVRMALLE ADVALPVVKS FIEQVKERAV
GTEVSKSLNP GQVFIKIVQA ELESVMGQAN EGLDLAAQPP AVVLMAGLQG AGKTTSVGKL
ARYLTDREKK KVLVVSADVY RPAAIKQLET LAIEVGVECF PSTIEQKPID IVNAAVDHAK
KKFFDVLLVD TAGRLHIDAE MMGEIKDLHQ AIKPIETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVILTKT DGDARGGAAL SVRHITGKPI KFLGMGEKID ALEPFHPERV ASRILGMGDV
LSLIEEVERK VDKDKAQRLA KKVQKGKGFD LQDFKEQLEQ MRNMGGMMSM MDKLPGMGNM
TAQVKDKAND KSFNQMEAII NSMTPLERAK PDTIKGSRKR RIAMGSGTQI QDVNRLLKQF
TQMQKMMKKM SGGGMKKMMR NMKGMMPPGG PGGMFPPR
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