Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1669 |
Symbol | |
ID | 4172260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1995158 |
End bp | 1995946 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638054679 |
Product | cytochrome c assembly protein |
Protein accession | YP_661245 |
Protein GI | 109897990 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTTAG GCTTAATTTG TTTTTGCCTA TATGCTGGCG CTGCTGGCGT AATTTTATTG AAGTTTTTTG ACCATAAAGG CCCCAACCTA AAACTGTCTT ATGTATTAGC TATCGCAGCG ATAGCCATGC ATGCTTGGCT ATTAAATAAC GATATTTTTG TTAGCCTTGG CGAGAATTTA AGCATGCTCA ATGTTGCTTC ACTTGTCGCA TGGTTGATTA GTGTGACCAT GTTGATAGCC GCCTTTACCA TGCCAAATAC CATTTTACTG CCTGTGGTGT ACTCATTTAC TGGCGTCATA ATTCTGCTTG ACCTCTTTAT TCCCGACGCG CACATTATGC AAATTGGCGT GCGCCCTGAA TTAATGATTC ACATAGGGTT AGCGCTATTT GCTTATGCTT GCCTTGGTAT TGCCTTACTC TACGCGCTAC AGTTGGCATA CATCAACATG CGCCTTAAAG AGAAAAAAGC CTCGCTCCTG CACTCTTCCC TCCCCCCGTT GATGATGGTT GAAGGCATCC TCTTCAAATT GCTTACCGTT GGTACTATTC TTCTAACTCT GTCATTAATA AGTGGGTTTG TATTCTTAGA AAACATGTTC GGCCAAGGGC AAGCTCACAA GACCATTTTG TCGATATTGG CTTGGTTGGT GTTTTCTGTT GAGCTATTTG GACACTTCAA ATTTGGTTGG CGCGGTAAAC CCATTATTTT CGCCACTATT TTGGGCTCAA TACTTTTGAG TCTGGCTTAT TTTGGTAGTC GGTTTGTCAA AGAAATAATT CTAAGCTGA
|
Protein sequence | MLLGLICFCL YAGAAGVILL KFFDHKGPNL KLSYVLAIAA IAMHAWLLNN DIFVSLGENL SMLNVASLVA WLISVTMLIA AFTMPNTILL PVVYSFTGVI ILLDLFIPDA HIMQIGVRPE LMIHIGLALF AYACLGIALL YALQLAYINM RLKEKKASLL HSSLPPLMMV EGILFKLLTV GTILLTLSLI SGFVFLENMF GQGQAHKTIL SILAWLVFSV ELFGHFKFGW RGKPIIFATI LGSILLSLAY FGSRFVKEII LS
|
| |