Gene Patl_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1669 
Symbol 
ID4172260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1995158 
End bp1995946 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content42% 
IMG OID638054679 
Productcytochrome c assembly protein 
Protein accessionYP_661245 
Protein GI109897990 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTAG GCTTAATTTG TTTTTGCCTA TATGCTGGCG CTGCTGGCGT AATTTTATTG 
AAGTTTTTTG ACCATAAAGG CCCCAACCTA AAACTGTCTT ATGTATTAGC TATCGCAGCG
ATAGCCATGC ATGCTTGGCT ATTAAATAAC GATATTTTTG TTAGCCTTGG CGAGAATTTA
AGCATGCTCA ATGTTGCTTC ACTTGTCGCA TGGTTGATTA GTGTGACCAT GTTGATAGCC
GCCTTTACCA TGCCAAATAC CATTTTACTG CCTGTGGTGT ACTCATTTAC TGGCGTCATA
ATTCTGCTTG ACCTCTTTAT TCCCGACGCG CACATTATGC AAATTGGCGT GCGCCCTGAA
TTAATGATTC ACATAGGGTT AGCGCTATTT GCTTATGCTT GCCTTGGTAT TGCCTTACTC
TACGCGCTAC AGTTGGCATA CATCAACATG CGCCTTAAAG AGAAAAAAGC CTCGCTCCTG
CACTCTTCCC TCCCCCCGTT GATGATGGTT GAAGGCATCC TCTTCAAATT GCTTACCGTT
GGTACTATTC TTCTAACTCT GTCATTAATA AGTGGGTTTG TATTCTTAGA AAACATGTTC
GGCCAAGGGC AAGCTCACAA GACCATTTTG TCGATATTGG CTTGGTTGGT GTTTTCTGTT
GAGCTATTTG GACACTTCAA ATTTGGTTGG CGCGGTAAAC CCATTATTTT CGCCACTATT
TTGGGCTCAA TACTTTTGAG TCTGGCTTAT TTTGGTAGTC GGTTTGTCAA AGAAATAATT
CTAAGCTGA
 
Protein sequence
MLLGLICFCL YAGAAGVILL KFFDHKGPNL KLSYVLAIAA IAMHAWLLNN DIFVSLGENL 
SMLNVASLVA WLISVTMLIA AFTMPNTILL PVVYSFTGVI ILLDLFIPDA HIMQIGVRPE
LMIHIGLALF AYACLGIALL YALQLAYINM RLKEKKASLL HSSLPPLMMV EGILFKLLTV
GTILLTLSLI SGFVFLENMF GQGQAHKTIL SILAWLVFSV ELFGHFKFGW RGKPIIFATI
LGSILLSLAY FGSRFVKEII LS