| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1666 |
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| Symbol | |
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| ID | 4172257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1990112 |
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| End bp | 1992949 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054676 |
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| Product | peptidase M16-like |
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| Protein accession | YP_661242 |
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| Protein GI | 109897987 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA ATCCGAGAGT TGAGTGTTTT TTGCGTTATG CTATTTCAGC GCAATATATG
AAAACAGGAT CTAGTCTTTT GCTTACTCAT CGCCTCGATA ATCGTCACTA TCACTTTTCT
CAGTTTGAGA ACGGCTTGAA AGTGATATTC GTCGAAGACC CAAGCAGTGA AGTGTGCAAC
GTAGCGGCTA CTGTTGGCAA TGGTCATTTT AGTGATCCTA TTGATTGCTT AGGCTTGAGC
CATTTGTTGG AACATATGCT GTTTCAAGGC AACAAAAAAT ATAAAACGAT AGATGCGTTT
GATACTTTTC TTTCTTTACA TGGCGGCTCG GTAAACGCTG CCACTGGCTC AGAATATAGT
CACTATTACT TTTCGGTAAC CGGTGAACAT CTCTCGTCTG CACTTGATCA TTTCAGTCAG
TTATTGACAG CGCCTTTATT TGAAACAGAG GCAATTGAAA AAGAAATCGG CGCGATTGAT
GCTGAGTTTT CATTAAAAAT ACACGACGAT TTGCGCAGGC TATATGAGGT GCACAAGGAA
ACGGCTAACC CGGACCACCC TTTTAGTCAA TTTTCTGTCG GTAATGCAAC CACCTTGGGT
GAACTTAATT TACAAGAAGT GCGGCAGCGT CTAAAAACAC TGCATCAAGA TAAATACGTC
TCTCAAAATA TCGCATTGTG CATCATCAGC CCATTTAGTC ATCAAACGAG TTTAACGCTC
ATTGAGCAAT ATTTTGGACA ACTGGAAAAT AGAAAACCGT CTAAGCGACC CCCTTTACCA
GCACTTTACC TGCCCGAGCA GTTGGGTATT AGAATTGATA TTACCCCCCT AAAATCGGCT
CGCAGGCTTA TCGTCACGTT CGCACTGCCA TGTGTACACC ATTATTATCG CACTAAACCG
CTAAGTATTA TCAGCGAGTT ATTGGCTGAT GAGGGCCCAA ATGGCTTACT TGGATTTTTT
AAAGAAAAGG GATTCGCTAC CAATATTAGT GTCGGTGGTG GTATCGAAGG CAGTAACTTT
CGAGACTTCA ATGTCAACTT ACAACTAACA GAATTGGGGT TAGCCAACAT TGACTCCATG
TTAGAAACGC TATTTCAATA CTTAGAGAAT ATTAGGCAGC ACAGCAAACT GCGCTTCTTT
GATGAAAAGA AAGCGTTGCT GGAACAAATC TGGCAATTTG CTGATGCCAT AAAACCGATT
GATGAAGCTG TTAGCTTATC CAGCGCAATA TTTCTCTACC CTTGTGAACA CCTTATTGCC
TCAGAATACA TACTCGATAA GGCCGACCCT TCAATTGTGG ACGAAATACT GGGCTTTTTT
ACGCCGTCAA ATATGCGCGT TAAAGTCGTT TCCCCTGATG CTCAAACGAA CCAAATAAGC
CAGTGGTACA ACACCCCTTA CGCAGTGTCT CCCCTGCCCC CTCAATTGCT AAAGAAATTG
CAAAATGAGA GTTGCAGTTC GCTCTTAATG TTACCTGAAG AAAATCAATT TCTGAGCCTC
GAGCATACAT TGATTCAAGC TGAAAAGAAG TATTCTGTAC CCCAAAACAT AGTTGCATCA
GAGGACTTCA ATGTCTGGTT TGGTCAAGAT ACCCAATTTG GTTTACCAAG AGGTGATTGC
TATATCTCAT TCGATTGCCA AGCAGCCACC ACTGGGGTTG AAGCGACAGC ATCTAGAAAA
CTGTGGATTG CCTTACTCAA TAACCATTTC CAGCAAGCTT ATTATCAAGC AAATGTAGCA
GGGCTTAATT ATCATTTGTA TTCACACCAA TGTGGTTTTT CTTTGCATAC CAGTGGCTTT
AGCGCCAAGC AACTGACCTT TAATCAGGAG CTAATAGATC AATTACACTC TTTTGAAGAC
TTTGAAAAAC ACTTTGAGCA GATTAAACAA CAACAATGTC AGAGCCTACA CAACAACTTA
CTGAATAAAC CCATCAACCG ATTATTCGCC AGACTCTCGG CTTTCATGCA GCAAAATACC
CATACACCAC TGAGTATGGT CGCTGCCATG GAGAGCACAA CACTTGAACA TGTCCACACC
GTAAAAGGCC AATTGCTAAA TGATAGATAT ATGGAATCTC TCATTTTTGG AAACTGGGAT
ATCAATCACG TACACCGGTT CTCGGATAAA TTACATCAAA AACACGCATT ATATAGCGGG
CACAAAAAGC TATCGAGGAG TGTATTTGAT TTATCAAAGC AAGATTCGTT ACTTCACGCC
CTTCCCTGTG AGCATCCGGA TGCCGCTGTG GTCATTTATT ACCAATCTCC CAATACCGGG
CGCCGAGACA CATTGTTGAC GATATTATTA GAACAATTAG TGTCACCTGT CTTTTTTAAC
TTTGCCCGCC AGCAAGCGCA ATTGGGTTAT TTAGTGGGGA GTGGTTATGT GCCGTTCAAC
CAACATCCCG GCATAGCATT CTATGTGCAA TCACCTAAAT ATTCGGCGCA ATACCTCATT
ACCGTCATCC GAGACTTTTT GAAAAAGTTA ACAGTAGATC TATTGTCTTA TCAGAAAAAT
TGGCGTGACA TAAAACATGG CGTGATGAAG CAATTATGTC AAAGAGATGC AAATCTAAGT
ATCAAGAGTC AACGTTTGTG GTCTGCATTA GGCAATCAAG ACTATCGTTT TTCTCAAAAT
AGAGACACGG CAAATGAATT AGAATGCATC GAGTTTTCGG ATCTAATGAA CTTCGTAAAC
GGTCTCATCA TCGGTAAAAA CACGGGTGAA TTAATACTGT ACAGCGACCC TAAGCATTCA
ATATCGGCCG ATGAGCTTTT GACGACTCCA GTTGACGATG TCTCGGAGTT TAAAAAACGC
ACGCCGTTAG TAGAATAA
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| Protein sequence | MFENPRVECF LRYAISAQYM KTGSSLLLTH RLDNRHYHFS QFENGLKVIF VEDPSSEVCN
VAATVGNGHF SDPIDCLGLS HLLEHMLFQG NKKYKTIDAF DTFLSLHGGS VNAATGSEYS
HYYFSVTGEH LSSALDHFSQ LLTAPLFETE AIEKEIGAID AEFSLKIHDD LRRLYEVHKE
TANPDHPFSQ FSVGNATTLG ELNLQEVRQR LKTLHQDKYV SQNIALCIIS PFSHQTSLTL
IEQYFGQLEN RKPSKRPPLP ALYLPEQLGI RIDITPLKSA RRLIVTFALP CVHHYYRTKP
LSIISELLAD EGPNGLLGFF KEKGFATNIS VGGGIEGSNF RDFNVNLQLT ELGLANIDSM
LETLFQYLEN IRQHSKLRFF DEKKALLEQI WQFADAIKPI DEAVSLSSAI FLYPCEHLIA
SEYILDKADP SIVDEILGFF TPSNMRVKVV SPDAQTNQIS QWYNTPYAVS PLPPQLLKKL
QNESCSSLLM LPEENQFLSL EHTLIQAEKK YSVPQNIVAS EDFNVWFGQD TQFGLPRGDC
YISFDCQAAT TGVEATASRK LWIALLNNHF QQAYYQANVA GLNYHLYSHQ CGFSLHTSGF
SAKQLTFNQE LIDQLHSFED FEKHFEQIKQ QQCQSLHNNL LNKPINRLFA RLSAFMQQNT
HTPLSMVAAM ESTTLEHVHT VKGQLLNDRY MESLIFGNWD INHVHRFSDK LHQKHALYSG
HKKLSRSVFD LSKQDSLLHA LPCEHPDAAV VIYYQSPNTG RRDTLLTILL EQLVSPVFFN
FARQQAQLGY LVGSGYVPFN QHPGIAFYVQ SPKYSAQYLI TVIRDFLKKL TVDLLSYQKN
WRDIKHGVMK QLCQRDANLS IKSQRLWSAL GNQDYRFSQN RDTANELECI EFSDLMNFVN
GLIIGKNTGE LILYSDPKHS ISADELLTTP VDDVSEFKKR TPLVE
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