Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1660 |
Symbol | |
ID | 4172251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1978384 |
End bp | 1978887 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638054670 |
Product | hypothetical protein |
Protein accession | YP_661236 |
Protein GI | 109897981 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCCGT TAGACCAATT AAAAGACATC CACATTCCTT CTCAAATCAG CCCTTGGCCG CCGGCCTATG GTTGGTGGTT AGTCGCCTTT TTTATCCTTT TAGTTCTCAT TGTGCTCATC ACCGCATGGG TGAAACACCG ACAATATAAC GCCGCACGAC GCCATGCTCT GAATGAACTA GCTTCAATCA CAAGCAATCA ATCTGATTGG CCAATTCGTA TGAATACTTT GCTCAAGCGT ACTTGCATGC ATTATTTACC GAGTGAGCAA CATGCAAATC TGCACTCTCA GCGCTGGCAA GCTTATCTCT GTGAGCAGTT GCCGTCGTCC CAACAAGGTT CCTTTAACGC GGCCTTTTCA GCATTGCAAA CACAACTCTA CCGCCCAGCT ACCGCGGATA GTACGCAATT TACTGCTATT CAGGCCCAAG TCGGCGTATG GCTAAAGTAC GCCAAATTAA AAGATGTTAG TGAGTCTTCT TCAACAGGAG CCGCACATGT TTGA
|
Protein sequence | MNPLDQLKDI HIPSQISPWP PAYGWWLVAF FILLVLIVLI TAWVKHRQYN AARRHALNEL ASITSNQSDW PIRMNTLLKR TCMHYLPSEQ HANLHSQRWQ AYLCEQLPSS QQGSFNAAFS ALQTQLYRPA TADSTQFTAI QAQVGVWLKY AKLKDVSESS STGAAHV
|
| |