Gene Patl_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1660 
Symbol 
ID4172251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1978384 
End bp1978887 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content47% 
IMG OID638054670 
Producthypothetical protein 
Protein accessionYP_661236 
Protein GI109897981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGT TAGACCAATT AAAAGACATC CACATTCCTT CTCAAATCAG CCCTTGGCCG 
CCGGCCTATG GTTGGTGGTT AGTCGCCTTT TTTATCCTTT TAGTTCTCAT TGTGCTCATC
ACCGCATGGG TGAAACACCG ACAATATAAC GCCGCACGAC GCCATGCTCT GAATGAACTA
GCTTCAATCA CAAGCAATCA ATCTGATTGG CCAATTCGTA TGAATACTTT GCTCAAGCGT
ACTTGCATGC ATTATTTACC GAGTGAGCAA CATGCAAATC TGCACTCTCA GCGCTGGCAA
GCTTATCTCT GTGAGCAGTT GCCGTCGTCC CAACAAGGTT CCTTTAACGC GGCCTTTTCA
GCATTGCAAA CACAACTCTA CCGCCCAGCT ACCGCGGATA GTACGCAATT TACTGCTATT
CAGGCCCAAG TCGGCGTATG GCTAAAGTAC GCCAAATTAA AAGATGTTAG TGAGTCTTCT
TCAACAGGAG CCGCACATGT TTGA
 
Protein sequence
MNPLDQLKDI HIPSQISPWP PAYGWWLVAF FILLVLIVLI TAWVKHRQYN AARRHALNEL 
ASITSNQSDW PIRMNTLLKR TCMHYLPSEQ HANLHSQRWQ AYLCEQLPSS QQGSFNAAFS
ALQTQLYRPA TADSTQFTAI QAQVGVWLKY AKLKDVSESS STGAAHV