Gene Patl_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1659 
Symbol 
ID4172250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1977360 
End bp1978391 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content47% 
IMG OID638054669 
Productvon Willebrand factor, type A 
Protein accessionYP_661235 
Protein GI109897980 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.863974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGT TTGCATGGTG GTGGATGTGG TTCGCTTTAC CGTTACCCAT ATTGGTTTAC 
TTGTTGCCCG CAAAGGCACA AGTGCAATCT GCTGCTTTGA GGGTACCTCA CCTGCCCCAA
GGGATCCAAA ACGTCTCTAA GCCACCCACA AGTAGAAAGG CATTCTTGAT AATTGCCACC
ATAGGCTGGG TTGCCCTAGT GAGTGCAAGT GCTCGCCCCC AATGGTTAGG CGAGCCCGTT
AGTATTCCCG CAGAAGGCCG CGACCTGATG ATTGCGGTTG ATTTATCTGG CAGTATGAAA
ATTGACGATA TGCAAGTTAA CGGTCGTCAA GTCGATCGCT TGCAAATGAT AAAGTCAGTG
TTACATGACT TCATTCAACG TCGCATTGGT GACCGATTAG GGCTTATTTT CTTTGCTGAC
ACAGCCTACT TGCAAGCACC CTTGACTTAC GATCGTGAGA CAGTGTCACA ATTATTAAAC
GAGTCGCTTA TTGGCCTGGT GGGTGAACAA ACGGCTATCG GGGATGCCAT TGGTTTAGCC
ATCAAGCGCT TCAAGAGCAA AGAAGAGTCA AACAAAGTAT TGATCCTGTT AACTGACGGG
CAAAATACCG CGGGTAACAT TACGCCGGAA CAAGCCAATG AACTAGCCAT TAACAACGGC
GTCACATTAT ACACAATAGG CGTCGGTGCC GACCAAATGT TAGTACAAAG TATCTTTGGC
AGTCGCCAAG TCAATCCCTC ACAAGAGTTA GATGAAGGCA TGTTAACCAC CCTTGCAGAA
TCCACTGGGG GCCGCTACTT TCGTGCAAGA GACGCCCAAA GCCTAACGGA AATTTATAGC
AAGCTAGACG AATTAGAGCC CATCGCTAGA GAAAGTCGAC AAATGCGCCC GCTGCAGGCA
CTTTATTTCT ACCCCTTAGG CTTGGCGCTA CTTATTTCCT TATTACTGGC CCTTAAACCG
CTTGTCTCCA GCTGGTTGTT TAATCTTAAA AACGCTAGAA CATCCAAAGA AAGGAGCCAG
ATTGATGTTT GA
 
Protein sequence
MFEFAWWWMW FALPLPILVY LLPAKAQVQS AALRVPHLPQ GIQNVSKPPT SRKAFLIIAT 
IGWVALVSAS ARPQWLGEPV SIPAEGRDLM IAVDLSGSMK IDDMQVNGRQ VDRLQMIKSV
LHDFIQRRIG DRLGLIFFAD TAYLQAPLTY DRETVSQLLN ESLIGLVGEQ TAIGDAIGLA
IKRFKSKEES NKVLILLTDG QNTAGNITPE QANELAINNG VTLYTIGVGA DQMLVQSIFG
SRQVNPSQEL DEGMLTTLAE STGGRYFRAR DAQSLTEIYS KLDELEPIAR ESRQMRPLQA
LYFYPLGLAL LISLLLALKP LVSSWLFNLK NARTSKERSQ IDV