| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1657 |
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| Symbol | |
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| ID | 4172248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1973665 |
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| End bp | 1975419 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054667 |
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| Product | BatD protein |
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| Protein accession | YP_661233 |
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| Protein GI | 109897978 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0760039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAT TTATCCGTTA TTTATCTCGT TCATGTTTAT TCCTCTGGGC CTTAAGCACA
TTTGCTCTTG CGCAAATAGA TGAACTGTCA GCCACGGTCG ATAAAAACCC CGTACTCGCT
GATGAATCGA TAACCCTAAG TGTGGTCGCA TCGGGCGATG CATCTCGCGA GGCATTCGAT
CCTAGCCCAT TGAACGCAGA TTTTATCGTA GGCAGAACCT CTGTTAGCTC GCAAACCCAA
ATGATAAACT TTGACACAAC CCGCACCACC ATTTGGACCA CCGTTCTTAT TCCACGCAAG
CCAGGGCGCT TTGTCATTCC AGCATTTACC ATAGAAGGCA AAAGCTCAGC ACCCATTAAT
ATGATGGTTT TACCGGTATC GGCTCGTCAA AGTACAGAAG GTCGAGATGT GTATGTCACA
ACGTCAGTAG ACACAGATGA AACCTACCTA CAGCAACAAA TTCGTTATAC CGTAAAGTTG
TTTCTTGCCA GAGACCTGCA GCGAGGTAGC TTATCGGCTC CTACGTTGGC CGACGGAGAA
ATTCGACAAA TTGGTAAAGA TGCAGAATAC AACGACATCG TCGATGGAAA ACGCTATCGG
GTGATTGAAC GCACCTTTGC GGTTATTCCA CAAAAGAGCG GTACCTTTAC TATCCAAGGC
CCAATGTTTG AAGGCGAAGT AGTTCAGGAT AGGCAACAAA GCTTTGGTTT CTTCAGCCGC
AGTAAAACCA TTAATCGTGT GGGGCCAGCA CAAGAAATAA CCGTGAAACC CATTCCGGCC
AATTATTCTG GTACCTGGTT GCCTAGTGAT TATGTTGAGC TACACGAAGA GTGGCAACCT
GATGCATCTA AATTCACGGT CGGTGAGCCA ATCACCCGCA CTTTGACTCT TACCGCTGTA
GGTGTTGATG AAGCGCAGCT GCCAAGTATC AATAGTCAAT ATCCCAGCGG CGTGAAGGTT
TACCCTAACC AACCAAATAC CACCACTGTT GAAAAAGACA ATACGCTCAT CGCCCAGCGC
ACTGAAACCA TCGCGATCAT TCCCAGTCAA GCGGGTGAAT TCACGCTAGA TGAAGTGAGC
GTTCCTTGGT TTAATATTGT CAGCGGACAA GTAGAATATG CCACGCTGCC CAAACGCATC
ATTACGGTCG TTGCAGGCGC TAATGATACG TCATCCTCCA ACATTCCACC TGCTGCTGTT
GGCAAAAACG AACAGTTCCC CCCTACTGTG CAAACTGCAG AACAGGCCCC CCAGCAGGAC
AGCCAACACA GCGTTGAACA ATCAATCTCA AGGGTTAGCC AAACAACCAA TCTCTGGTTC
TGGCTCAGCT GCACATTAAT AATCTTGTGG GTAACCACAC TTGTTGGCTG GGCGGCGCAC
GTTCGTCGCT TAACAACCAA AGCAAATGTG TTTAGTAGAG CCAATAATGG CGCAGCGAAT
AAGACGAATC CTTCTGAGAA GCAAGCATGG AACTCGTTGC AAGCAGCTAT CAGCAAACAG
GATACGCAGG CAATCATTCA GGCATTAACA TTATGGCTAA ATACGTTAAC GGGAAGTAAT
GGTAAATCAA TCAATACATT ACAAAACGAA TTTAGCAACG CCTCGCTAGA TAATGCGATA
AGTACATTAT ATGCATCTAA ATTTGGCGCC GAGGACAAAC AGTGGAACAA GGAAGAAATT
GTCTCAATAC TTAGCTTAAT TCGACAGCAA GCTAGCGCTC ATCACAGCAA CGAAAAATTA
GCCCCACTTT ATTAG
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| Protein sequence | MQLFIRYLSR SCLFLWALST FALAQIDELS ATVDKNPVLA DESITLSVVA SGDASREAFD
PSPLNADFIV GRTSVSSQTQ MINFDTTRTT IWTTVLIPRK PGRFVIPAFT IEGKSSAPIN
MMVLPVSARQ STEGRDVYVT TSVDTDETYL QQQIRYTVKL FLARDLQRGS LSAPTLADGE
IRQIGKDAEY NDIVDGKRYR VIERTFAVIP QKSGTFTIQG PMFEGEVVQD RQQSFGFFSR
SKTINRVGPA QEITVKPIPA NYSGTWLPSD YVELHEEWQP DASKFTVGEP ITRTLTLTAV
GVDEAQLPSI NSQYPSGVKV YPNQPNTTTV EKDNTLIAQR TETIAIIPSQ AGEFTLDEVS
VPWFNIVSGQ VEYATLPKRI ITVVAGANDT SSSNIPPAAV GKNEQFPPTV QTAEQAPQQD
SQHSVEQSIS RVSQTTNLWF WLSCTLIILW VTTLVGWAAH VRRLTTKANV FSRANNGAAN
KTNPSEKQAW NSLQAAISKQ DTQAIIQALT LWLNTLTGSN GKSINTLQNE FSNASLDNAI
STLYASKFGA EDKQWNKEEI VSILSLIRQQ ASAHHSNEKL APLY
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