Gene Patl_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1655 
Symbol 
ID4174084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1972221 
End bp1972928 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID638054665 
Producthypothetical protein 
Protein accessionYP_661231 
Protein GI109897976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.215892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATT TAGAATTTCG CAGAACCATT TATGCTGATC CGAATTGCGA TGACATACGA 
GTCAAAGAAG CGGCAGCACA AGACCCTGCA AAACACGAAT TTTGGTCTGA GCAAAAAAAG 
ATCGATGCGA GTTTACAAGC GGCGATGAAA GTCGATGTGC CTGACGATTT AGCACACAAA 
CTTATTTTGC GCCAAACTAT GCAAACTCAC CAACACAATA AGAAGCGTGC CCGGGTGCAT 
TTAGCGCTAG CGGCATCTTT AGCGTTTGTT GTGGGTGTTA GTTTCACGCT GTGGCAACAA 
CAAAATTACA TTGATGTGTC AGCTCAATCA CTGGCTCACG TATATCATGA AGGTCCTCAT 
GCGCTTGATG CGAACGAAGA TTTCACCTTG CAACAAGTCA ACGCTAAGCT CGCCCAATAC 
GGTGGTCATT TAAATGAGGA TATGGGGCAA GTATTTTATG CAAACCACTG TGACTTCGAA 
GGGGTTAGAA GCCTGCACTT AGTCATGCAA GGCGATAATG GCAAAGTGAC TGTATTTATT 
GTGCCTCATA AAGACGGTTA CAAAGCAAAA GACAGAGTCA CCGATGGCTA TCTAACCGCC 
GAAGCAGTGG ATATGAAAGA TACCAGCTTA GTGATCGTCA GTGAAAATGT ACATGATGTA 
GAGCAGACCA AAGATAAATT GACTAGAGGC ATGACCTTCT CTGCCTAA
 
Protein sequence
MDDLEFRRTI YADPNCDDIR VKEAAAQDPA KHEFWSEQKK IDASLQAAMK VDVPDDLAHK 
LILRQTMQTH QHNKKRARVH LALAASLAFV VGVSFTLWQQ QNYIDVSAQS LAHVYHEGPH 
ALDANEDFTL QQVNAKLAQY GGHLNEDMGQ VFYANHCDFE GVRSLHLVMQ GDNGKVTVFI 
VPHKDGYKAK DRVTDGYLTA EAVDMKDTSL VIVSENVHDV EQTKDKLTRG MTFSA