| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1645 |
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| Symbol | |
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| ID | 4174074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1959140 |
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| End bp | 1961938 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054655 |
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| Product | hypothetical protein |
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| Protein accession | YP_661221 |
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| Protein GI | 109897966 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTTA AAAAACTGTT TCGTCCTAAG CATCAAGATC CAAAACCTGA AGTGAGAGTA
GTCGCTATTG ACTCGTTGTC TCCAGACTTG CCAGAACAAA AGTCAATTCT GCATGAATTG
GCGTTCAACG ATGAAGATGT GAATGTGAGT TTAGCCGCGC TGACAAAGTT AAATAGCTTC
GTGTTGTGGT ACAAGATGGC AGAGATAGCC AAAAACGAAC GTGTGCTCAA GCGCGCTCAA
CAAGTCGTTG ATAATACACT ATTTGACGAC GATGAGAGCC TATTGAGTAA AGCTCAGAAA
CGCGAATTTT CCTATGAGTG TAAAAACAGT AAATTGCTCG AGCGCTTGAT TAAGCAGCCT
TGGGTGCAGC AAGAGCCTAA ATTGGTACTG CATATTTTGT CCGTACTGAA TAAACCGCAA
CTGGCGTTAC CTATTCTGTT ATCCAGCGAT GATGACGTTC TTCAAAGTGC GCTTCTTGCG
TATGCGGACA GTCCAGCAAG CTTACAAAAA ATAATCAAAA AAGCTTCTAG TGAAAGCATT
AAGTCTCAGG CGCAAGATAA GTTAAATCAG TTAGCATTTG CCAAAGCCCA ACCGATTGAA
GTTGAAAAGG GAACGCGTCT CGTTTTGTCT CGCTTGTTAG CGTTAAAAGA GCAGCGTGAT
TACCGAAAGT TGGTGGATAC TCGAACCAAA CTAAATGACG AATACGTAAT TTTTTCAGCA
CAATTCGATT GCTTATCACA AGAGAAACGC CAAGAGTTTA CGGCTAAATA TACTGATATA
ATCAATAAGT TAGACATTCT AGATGCAGAA TTAGCACCTG TTTATCAGGC GCAGCAGCGC
AAACGAGATG TAATAGATGC CGTGCAGCAT GCCACGGCAG ATACGCAAGC GATGCTCGTG
TGGTTGTCAG ATATTTTATC AAGCGATGTA TCAAGTGTTA CGTTGGCACA AACGGAGCAA
GCACAAACAG AAATTCAGAA TCGTATGTCT CGTATTGACA CTTTGTTATC GGATGCCAAC
TTAGCGGGCA TGGCCGTGCA AACGAAAGCG CTACAGGCTT TACTTGATGC CTTACAAAAA
CGCCAGCACA CGTTCAATCA TTTACCTGCA TTTCAAGATG CCCTAAAACA AGCGGATTCG
TTATTGACGG ATTTTGCCCA GTTGGCCATC CCTTCTCAAG GGGATGATGT GCAAAGTGCT
AAATCGATAT TGCAGAGCAC GACGCAGCAT TGGTTTGCGC TACGTGAAGC ATATCAAGAC
AGTTGGCCTA GAGCGCTTGA TCAAAGGTTT ACGCAATTAC AGAGTACATG GCGCAGTGCA
ATCAAAACCC TTTCAGCAAG TATTACTCAA GATGTGAACC GTATCCGCAG TAAAGCTAAG
GCCATTGATG TGCTTATCGA ACAGGGAAAA TACAAAGCGG CCATGGGTCT CTTTTCCAAG
GTCACTAAAT GGTTTGAAGC GTTACCTGAA CAAGAAAAAG CTCGCAATGA GCGCACACTC
GAACAGGTCA GCGCTAAAAT AGAGGAATTA AAGTCGTTGC AGGCCTACAT CGCCTTGCCG
CGAAAGCCCG CTTTGCTTGA AGAAGCAAAA GCGTTAGTTG ATGCTAAATT GCCAGTATCA
TTGCGGGCAG AGCAGGTGAA AGAGCTGCGT CGACGTTGGA ATAGTTTGGG TGTGTTGAAT
ACACCTGACG ATGATGTGCT CAATAAGCAG TTTGACGCGT TAATTGAACT TGCTTTTGCG
CCTTGTCGCG AACACTTTGA AAAGCAACAG TTGCAGCGCG AAAATAACCT TGCGCAAAAA
CAGGCTCTGA TCAACGAGAT TGGCACATTA GCTGAGCATG GTTTATCGGC TGATGCGTTA
GCAAAAGCGA TTCAACAGGT GCAGCAGAAG TGGCAAAACG TCGGTGATGT TGATTTCACT
GTTAAAACAC AAGTGAACAA TGCTTATCGT GAAGCCTTGG CGCCGTTGAA GAAACAAGTC
GAAGTGTATT TCAATGAGAA TACTGAGATG AAGCAAGCGC TTATCCTGCA AGCACAAGCA
TTGTCAGCGG TCGAAGATGT TAATGTCGCT ATTGAGCAAG CCAAAGCATT ACAAGAAAAG
TGGAAACACG TAGGCCAGAC CCAACGTAAA GTTGAAAATG CCTTGTGGGA TCAATTTCGA
AAAGCCAATG ATGTGATTTT TGCTAAGCGC AAAGCGCACA ATCAGCTACA GAAGCAGGAA
ATTAACGCGC AAGTAGCCGC CGCAGCTGAC ATATTGCAAA AATTGCAACA GGCGGTTAAT
GAAGCCCAAA CGTTTGATGA ATTGGATGGC ACTCACATTT TGCAAACTGA GCTAGAGGCA
CAATTGGTAG CGATGCCTAA AGCGTCAAGC TCTGGTTTAT TTCGTCGCTT ATCCGGGCTT
ATTGATGAAC GACAAACCAA ATTGGAGGGG TTGCAGCGCC AATCTAGAGC CCACGGTGTG
AGCGCACTAT TTGATATACT AAAGCGCTGG GAAACGCCTG CTTTGCCTGA CGATATAGAC
TCATTGCCTA ACCAATGGCA GCAGTCGTTT AAAGCTCTTG GGCAAAGTGA CGTACCTCGT
CTTAACTTAA CCTTGATGCT AGAAATAGTA TGCGATGTCC CTTCGCCACA AGCTGACGAA
GCGTTGCGTA AAGAAATACA GCTGCAATTG ATGGCCGATA AACTTCAGCA AGGCGTTGAA
TATGACAAAT CGTCATTACT GAAGTTATGG ATACAACATG GCCCTGTCGC AAAACAAGAG
CAGGTGTTGT TATCCCGTGC TCAACGATGC TTTGCTTAG
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| Protein sequence | MIFKKLFRPK HQDPKPEVRV VAIDSLSPDL PEQKSILHEL AFNDEDVNVS LAALTKLNSF
VLWYKMAEIA KNERVLKRAQ QVVDNTLFDD DESLLSKAQK REFSYECKNS KLLERLIKQP
WVQQEPKLVL HILSVLNKPQ LALPILLSSD DDVLQSALLA YADSPASLQK IIKKASSESI
KSQAQDKLNQ LAFAKAQPIE VEKGTRLVLS RLLALKEQRD YRKLVDTRTK LNDEYVIFSA
QFDCLSQEKR QEFTAKYTDI INKLDILDAE LAPVYQAQQR KRDVIDAVQH ATADTQAMLV
WLSDILSSDV SSVTLAQTEQ AQTEIQNRMS RIDTLLSDAN LAGMAVQTKA LQALLDALQK
RQHTFNHLPA FQDALKQADS LLTDFAQLAI PSQGDDVQSA KSILQSTTQH WFALREAYQD
SWPRALDQRF TQLQSTWRSA IKTLSASITQ DVNRIRSKAK AIDVLIEQGK YKAAMGLFSK
VTKWFEALPE QEKARNERTL EQVSAKIEEL KSLQAYIALP RKPALLEEAK ALVDAKLPVS
LRAEQVKELR RRWNSLGVLN TPDDDVLNKQ FDALIELAFA PCREHFEKQQ LQRENNLAQK
QALINEIGTL AEHGLSADAL AKAIQQVQQK WQNVGDVDFT VKTQVNNAYR EALAPLKKQV
EVYFNENTEM KQALILQAQA LSAVEDVNVA IEQAKALQEK WKHVGQTQRK VENALWDQFR
KANDVIFAKR KAHNQLQKQE INAQVAAAAD ILQKLQQAVN EAQTFDELDG THILQTELEA
QLVAMPKASS SGLFRRLSGL IDERQTKLEG LQRQSRAHGV SALFDILKRW ETPALPDDID
SLPNQWQQSF KALGQSDVPR LNLTLMLEIV CDVPSPQADE ALRKEIQLQL MADKLQQGVE
YDKSSLLKLW IQHGPVAKQE QVLLSRAQRC FA
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