Gene Patl_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1644 
Symbol 
ID4174073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1958869 
End bp1959150 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content41% 
IMG OID638054654 
Producthypothetical protein 
Protein accessionYP_661220 
Protein GI109897965 
COG category[S] Function unknown 
COG ID[COG3139] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCAG AAATGTTACT GAAATCGATG ACCCCAGAGG TTTATCAAAA ATTGTTGCAA 
GCGGTGGAAA CCGGTAAGTG GCTTGATGGC AACCCGTTAA CAGAAGGGCA ACGAGAAACG
ACTATGCAAG CTGTTATGTT GTATCAAGCG AAAATCCTTA AGTCAGATCA ACATATGACT
GTTGGGGCTA ACGGCGAAAT AGTGCAAAAA AGCCGTCAGC AATTTAAGCA AGAGCTAAAT
GATAAAAACA CCATAGCGCG GTTCACCGAA AATGATATTT AA
 
Protein sequence
MNPEMLLKSM TPEVYQKLLQ AVETGKWLDG NPLTEGQRET TMQAVMLYQA KILKSDQHMT 
VGANGEIVQK SRQQFKQELN DKNTIARFTE NDI