| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1635 |
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| Symbol | malQ |
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| ID | 4174064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1945673 |
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| End bp | 1947868 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054645 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_661211 |
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| Protein GI | 109897956 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCTT CATTGATTGA TCAGCTCGTA GAGCATCGCG GTATTGAGTC AAATTACACC
GATGCGTGGG GTAAACCTGC CACCATCGAA TCAACAGTGA AGAAGAAGCT GTTAGGCGTT
ATGGGATATA ACGTTGATGA TCAATCTGCT CTGGAAGAGC AAGTGAAGCA AGAAATGGTC
AAAGATTGGT TAACACCGCT CAATCCCGTT CATGTGCAAC GCAGCAATGA TTCGCTTTCC
TTTTGTGTGC GCCTACCCAT CGAGTTGGTG ACCGATGAAT ATAGCGCGCA ACTCACATTG
GAAAGCGGCG AAGTAATTGC TCATTCTTTC GAGCCCATCG ACGGTGAACT GGTTAACGTG
AATCATATTG ATGAGATAGA GTTTCACGAA TATTACATTA CAATCGAGTG CAACTTGCCT
TTGGGTTACC ACAACCTATC ACTAATAGTA GATGGCGAGT CGCTGAGCGA GATGCGCGTC
ATTATTGCGC CTCATGCATG CTATCAACCA CAAACGTTAT TAGACGGTAA TAAAGTGTGG
GGTTTGAGTG TGCAACTGTA TTGTCTGCGC AGTGATGATA ACTGGGGAGT AGGGGATTTT
AGCGACTTGG CTTATTTGAC CGCAGAGGCA GCGAAAACCG GTGCGGATTT TATCGGCTTA
AACCCCATTC ATTCATTGTA TCCTGCCAAC CCTAGCGCAT GCAGCCCTTA CGGGCCCTCA
TCTCGTCGTT GGTTAAATTT TATTTACATT GATGTTGCTG CCGTTGACGG GTATGAGCAA
GTTAGCACCA AGGCTATTGT GAATGCTGCT GAGTTCCAAG GGGCTATACA GCAAGCACGT
GGCAGTGAGT TAGTCGATTA TCCCGTCGTG ACCAAATTAA AACTTGAAGC ATTAAGCGCG
GTGTTTGACT GGCAACGCCA GCAATATTTT ACTAAGAACA CGACCCAAAA CCGCGCATTT
AAAGCATTTG TCGAGCAAGG GGGGGAAAGC CTACAAACCA TTGCTGTTTA TGATGCATTG
CAAGAGGATT TAGCCTTAAA AGGCAAAGCT TCATGGGGAT GGCCTGTCTT CCCCCCAGAG
TACGCTGATT TTAACGCCCC AGCAGTGGCT AAATTTGCCA AAGCGAACGC TAAACGTGTG
CAATTTTTCT TGTGGTTACA ATGGCAGGCT GCCCAGCAAT TTGAAAAAGC CAATAAAGTC
GCCCAAGACC ACAACATGCA GATTGGTTTG TATCGTGATT TGGCTGTAGG TGTCAGTGAA
GGCAGCGCAG AGATTTGGGG AAACAAAGCG TTGTACTGCA CTGAGGCAAG TGTGGGAGCG
CCACCAGATA TTTTAGGGCC GCTTGGGCAG ACATGGGGAT TGCCACCTAT GGATCCGCAC
AAATTATACG AGCAAGCGTA TCAACCGATC ATCGATTTGT TCAGTGCAAA TATGCATGCT
ACCGGCGCTT TACGCATCGA TCACGTGATG GCACTTTTGC GATTGTGGTG GGTGCCTAAA
GGGGATAGCG CTAAGCAAGG AGGCTATGTT TATTATCCTG TGGATGACTT ACTTGCGATC
TTGGCACTAG AAAGCCATCG CAATCAATCT ATGGTGATAG GTGAAGATTT AGGCACAGTG
CCGGAGGAAA TCCGTGAAAA GCTGGCCGAT AATGGCGTTT ATTCTTATCG CGTGTTCTTT
TTCGAACAAG CCAAAGATGG CGGGTTCTAT TCGCCTAGTC ATTATCCGGT GCAATCAATG
TCGACGTTAA CCACGCACGA TATGCCTACC TTAAATGGCT TCTGGCATTG CGACGATTTG
GCGTTAGGCA AGGAACTAGG CTTGTATCCA ACACAAGAGA TCCTTGCAAG CTTGTACGAG
AGCAGACATG ATAACAAACA GTCTATTTTA GATACCTTGC ATGGTCATCA TTCTATTTCT
GATGAAATCA GTGGAGATGT GAATCAAGTG GGTATGACCA AGGGACTCAA TTTTGGTATG
CAAACACACA TGGCTGGCGG TTCGAGCTCT CTGCTCAGTT TACAGCTAGA AGATTGGTTA
GAAATGGATA AACCCGTTAA TATTCCGGGT ACATTTAATG AATACCCGAA TTGGCAACGT
AAACTGACTC AAAGTTTACA ACAGATTTTT AGCAACCCTG AGCTACAAGC GTTAGCTCAT
CGCTTGACAG AGGTAAGACG TCAAGCAAAG CAATAA
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| Protein sequence | MTASLIDQLV EHRGIESNYT DAWGKPATIE STVKKKLLGV MGYNVDDQSA LEEQVKQEMV
KDWLTPLNPV HVQRSNDSLS FCVRLPIELV TDEYSAQLTL ESGEVIAHSF EPIDGELVNV
NHIDEIEFHE YYITIECNLP LGYHNLSLIV DGESLSEMRV IIAPHACYQP QTLLDGNKVW
GLSVQLYCLR SDDNWGVGDF SDLAYLTAEA AKTGADFIGL NPIHSLYPAN PSACSPYGPS
SRRWLNFIYI DVAAVDGYEQ VSTKAIVNAA EFQGAIQQAR GSELVDYPVV TKLKLEALSA
VFDWQRQQYF TKNTTQNRAF KAFVEQGGES LQTIAVYDAL QEDLALKGKA SWGWPVFPPE
YADFNAPAVA KFAKANAKRV QFFLWLQWQA AQQFEKANKV AQDHNMQIGL YRDLAVGVSE
GSAEIWGNKA LYCTEASVGA PPDILGPLGQ TWGLPPMDPH KLYEQAYQPI IDLFSANMHA
TGALRIDHVM ALLRLWWVPK GDSAKQGGYV YYPVDDLLAI LALESHRNQS MVIGEDLGTV
PEEIREKLAD NGVYSYRVFF FEQAKDGGFY SPSHYPVQSM STLTTHDMPT LNGFWHCDDL
ALGKELGLYP TQEILASLYE SRHDNKQSIL DTLHGHHSIS DEISGDVNQV GMTKGLNFGM
QTHMAGGSSS LLSLQLEDWL EMDKPVNIPG TFNEYPNWQR KLTQSLQQIF SNPELQALAH
RLTEVRRQAK Q
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