Gene Patl_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1634 
Symbol 
ID4174063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1944442 
End bp1945437 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content47% 
IMG OID638054644 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_661210 
Protein GI109897955 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.16452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTA AAATTGGTAT CAACGGTTTT GGCCGTATAG GTAGATTTGT TTTTCGCGCA 
GCATGTGAGC GCAGCGATAT CGAAGTAGTC GGTATCAACG ATTTATTAGA CGCAGATTAC 
ATGGCGTATA TGTTGAAGTA CGACTCAACT CACGGCCAGT TCAAAGGCAC TGTTGAAGTA 
CAAGACGGAC AACTGGTTGT TAACGGTAAA ACTATCCGCG TAACAGCTGA GCGCGACCCT 
GCTGCATTAG CATGGGGTGA CGTTGACGCG CAAGTCGTGG TTGAAGCGAC AGGCTTGTTC 
TTAACCGACG AAACCGCGCG TAAGCACATT AATGCTGGCG CTAAAAAAGT GGTTCTTTCG 
GCACCTTCTA AAGATGATAC ACCTATGTTC GTTATGGGTG TTAACCACGA CACATACGCT 
GGTCAAGAAG TGGTTTCAAA CGCATCATGT ACAACTAACT GTCTAGCGCC GCTGGCTAAA 
GTATTAAATG ATAACTTCGG TATTGTTGAC GGCCTGATGA CAACGGTACA CGCTACGACA 
GCGACGCAGA AGACCGTTGA TGGCCCTTCT CACAAAGATT GGCGCGGTGG ACGCGGTGCG 
TCTCAAAACA TCATCCCGTC ATCAACTGGC GCAGCAAAAG CCGTAGGTAA GGTTATTCCT 
GAGCTTAACG GTAAGTTAAC GGGTATGGCG TTCCGTGTGC CGACGGCTGA CGTTTCTGTG 
GTAGATTTAA CCGTCAACCT AGCTAAACCA GCAACTTACG CGCAAATTTG CGAAGTAATG 
AAAGCGGCAT CTGAAGGTGA TCTGAAAGGC ATTATGGGTT ATACAGAAGA CGCTGTTGTG 
TCTCAAGATT TCATTGGTGA TACACGTACG TCAATCTTTG ATGCCACCGC AGGTATCGCA 
CTAACCGACA CCTTCGTCAA ACTAGTATCT TGGTACGACA ACGAAATCGG TTACTCGAAT 
AAAGTATTGG ACTTGGTTGC TCATATCAGC AAATAA
 
Protein sequence
MTIKIGINGF GRIGRFVFRA ACERSDIEVV GINDLLDADY MAYMLKYDST HGQFKGTVEV 
QDGQLVVNGK TIRVTAERDP AALAWGDVDA QVVVEATGLF LTDETARKHI NAGAKKVVLS 
APSKDDTPMF VMGVNHDTYA GQEVVSNASC TTNCLAPLAK VLNDNFGIVD GLMTTVHATT 
ATQKTVDGPS HKDWRGGRGA SQNIIPSSTG AAKAVGKVIP ELNGKLTGMA FRVPTADVSV 
VDLTVNLAKP ATYAQICEVM KAASEGDLKG IMGYTEDAVV SQDFIGDTRT SIFDATAGIA 
LTDTFVKLVS WYDNEIGYSN KVLDLVAHIS K