Gene Patl_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1606 
Symbol 
ID4173860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1911630 
End bp1912910 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content46% 
IMG OID638054616 
ProductFolC bifunctional protein 
Protein accessionYP_661182 
Protein GI109897927 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATT TATCTTCTAT ACAGGCCTCT AGTTTTGAGG CCTGGTCTTT AAATGAGTGG 
CTTGACCACC TCAGCGCATT ACATCCTAAG AATATCGAAA TGGGCCTTGA GCGAGTGAAC
AAGGTCTTTG AGCAACTCAA TATCTCTTTT TCAAAGCAAA CCGTGGTCAC TGTTGCAGGT
ACTAACGGTA AAGGCACCAC CTGCGCATTT CTTGAACAAG CCTGCTTGGC AGCAGGCAAA
AGGGTTGGAG TTTATAGCTC ACCTCATCTG ATTCAGTACA CTGAACGAGT GCGCATTAAC
GGTATCGATG GGAGTGAGCA AGCCCACTGC CGAGCGTTTC AAGCCGTCGA GCGCGCTAGG
GGGGATATTC CTCTTACGTA TTTTGAGTTT GGTACCCTAG CAGGTCTTAA ACTTGTACAC
GATGCCAATG TGGATATCGC GTTACTTGAA GTGGGCTTAG GCGGGCGTTT GGATGCCGTG
AACGTGGTGT CGCCTGACAT TGCAGTGATC ACCAGTATCG ATTTGGACCA TCAAGATTTT
CTAGGTGATA CCAAAGAACT AGTGGCTGCA GAAAAAGCCG GCATCATGCG TGACAACATT
CCCGTGGTGG TGGGTGAGCC TGTGAAATAC CAAGCTTTGC TTGATGCTGT TTCTCAGCAC
AGCGCACTGG CATCTTGGCA GCATGTGGAT TTTGATTATC AACTAGCAGA TGATTATATG
GTGTGGAGCA ATCATCAGCT TAGTTACGCG CAATTACCCA TCCCGCATAT TCCTGCACAA
AACGTGTCTA CTGGCTTGCA GGTGATCCAA CTACTAAAGC TGGACTTAAG TGAAGGGGAT
TTGGCTAATG TGATCACTGA CACCAGACTA CCTGGTCGAT GTCAGTATAT CGGATATTCT
CCTGCCATTA TGGTTGATGT TGCCCATAAT CCTCATGCCA CGGGTTATTT ACTTTCGCAA
ATACGTAAGC TTGATTACGA CAGGCTTTAC TTAGTTGTGG GTATGTTGAA AGACAAAGAT
ATTCGCTCGA GTCTAGCGGA TTTTTCAAAC TTAAATGCGC ACTGGATGTT GGGCGGCTTA
GATGTGCCAA GAGGTGCTGC CGCTGCGGAT ATTAAATCAG TGTTAGACGA GCAACAAAAA
GTGCTAGAAT TTTCCACGGT TTGCCAGGCG TTTGAAAAAG CGAAGGCTTT AGCGCAAGAG
CAAGACTTGA TTGTTGTATT CGGTTCGTTT TTTACCGTAT CCGATATTCT TAAGCTATCA
AATAAAGGAA ATAACGAGTG A
 
Protein sequence
MTNLSSIQAS SFEAWSLNEW LDHLSALHPK NIEMGLERVN KVFEQLNISF SKQTVVTVAG 
TNGKGTTCAF LEQACLAAGK RVGVYSSPHL IQYTERVRIN GIDGSEQAHC RAFQAVERAR
GDIPLTYFEF GTLAGLKLVH DANVDIALLE VGLGGRLDAV NVVSPDIAVI TSIDLDHQDF
LGDTKELVAA EKAGIMRDNI PVVVGEPVKY QALLDAVSQH SALASWQHVD FDYQLADDYM
VWSNHQLSYA QLPIPHIPAQ NVSTGLQVIQ LLKLDLSEGD LANVITDTRL PGRCQYIGYS
PAIMVDVAHN PHATGYLLSQ IRKLDYDRLY LVVGMLKDKD IRSSLADFSN LNAHWMLGGL
DVPRGAAAAD IKSVLDEQQK VLEFSTVCQA FEKAKALAQE QDLIVVFGSF FTVSDILKLS
NKGNNE