| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1601 |
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| Symbol | |
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| ID | 4173855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1906292 |
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| End bp | 1907695 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054611 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_661177 |
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| Protein GI | 109897922 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTG GATCGTTACG CCAGCTTACG TTAGTTAGTT TTGCGCTTGT GCTCGTCCCT
TTGGTGGTGC TGTTGTGGCA TAGCCAGATT ACGTTAGGCA GAATGGGAGA AATCGCCACC
AACGAAGCTG AATTTTCAGT GGCTATGGTT CGGCGGGTTA ATAACTTGGA AAGTTTCTCA
GTGGATATTG AGCGACTCAT CCGCCAATAC CACGTGTTAG ACAAACCTGA GTTGAAAGAA
CTATCAGATA AATACGTGCA ACGCTTTACT GAGTCGCTCG GTAGCCTATG TGTGAAGCTT
GATAATTCCC GAGAATGTAA CGTGCTGAGC GACCGCCTTA CGTGGTTTCG AAGTTACGAC
AGGTTGAGCG ATGAATTGCT ACTTGATGCG CAATTAGCTG AATTTCGCCG AGCGTTGACT
GAGTTGGGAG CGAGTGTGGA CTCTTTACTC GACGACCGAA TCAAACAACG TCAAGCGTAC
GTAAGTTCAG TTCAGCAAAC GCAAGCATGG TTGACGGCTT TGCTGGTGAG CATTAGTTTG
ATACTGATCA TTTTTGGCAG TCAGCTGATT CTGCGCCCTG TAAGAAAATT GGAGCATGTT
ATTCAGGCCA TTTCGCTGCA AGAAGACGAA TTACCTGAAA TTTCTAACTC GGGGCCTAAG
GAACTGATCC TAGTTGAACG CAAACTACAT CGCCTTTCAG ATAGGCTAAC CCAGCTAGAG
CACTTACGCC ACGCGTTGCT GCGTCATGCG TCTCATGAGT TGAAAACGCC ACTGGCGAGC
ATTAAAGAAG GCTGCTCACT GTTAACTGAG CAAGTGGTTG GAGAGCTCAA CGATCGGCAA
ATGGAAGTGA TGTCTTTGCT TAATAGCAGC ACAGATCGCC TTAACACCTT GATCATGCAG
TTGCTTGATT ACAACTTACT ACTGCAGCAG GCAAAGCCTG ATTTTCAGTG GTTAAAAACA
TCCTCTTTGA TGGAAGGTTT TATTACAGAC AACCGCCTAG CACTGCAACA GAACAACCAT
AAGTTGGAAA CGAAAATTGA GTTGCCGCAA GTGTACGCCG ACGCCAACTT ATTTAGGCGT
ATTCTTGACA ATCTGTTGTC AAATGCCATT GCCCATGGCA GCAAGGGCCG CCCAATTAAT
ATTAAGCTAT ACCAAGAAAA ACATGTTCAG GTGTTAGACG TTTCAAATCG CGGGCAAAAA
ATATCACCTG AACAAAGGGC TATTTTATTC GAGCCATTTA ATCGCGGTGA GGGAAAACGT
AATGACCGTA TTATTGGTTC CGGGCTAGGG TTGTCGATCG TTGCCGATTG TGCGCGTATG
ATGCGAGGGA AAGTTGAAAT TGTCGACGTG GATTATGCGG ATGTGTGCTT TCGCGTTTCA
ATCCCCTTAA CTGAGAAAAA GTAA
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| Protein sequence | MQLGSLRQLT LVSFALVLVP LVVLLWHSQI TLGRMGEIAT NEAEFSVAMV RRVNNLESFS
VDIERLIRQY HVLDKPELKE LSDKYVQRFT ESLGSLCVKL DNSRECNVLS DRLTWFRSYD
RLSDELLLDA QLAEFRRALT ELGASVDSLL DDRIKQRQAY VSSVQQTQAW LTALLVSISL
ILIIFGSQLI LRPVRKLEHV IQAISLQEDE LPEISNSGPK ELILVERKLH RLSDRLTQLE
HLRHALLRHA SHELKTPLAS IKEGCSLLTE QVVGELNDRQ MEVMSLLNSS TDRLNTLIMQ
LLDYNLLLQQ AKPDFQWLKT SSLMEGFITD NRLALQQNNH KLETKIELPQ VYADANLFRR
ILDNLLSNAI AHGSKGRPIN IKLYQEKHVQ VLDVSNRGQK ISPEQRAILF EPFNRGEGKR
NDRIIGSGLG LSIVADCARM MRGKVEIVDV DYADVCFRVS IPLTEKK
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