Gene Patl_1589 details

Gene Information

• Locus tag: Patl_1589
• ID: 4173843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1895203
• End bp: 1895871
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054599
• Product: hypothetical protein
• Protein accession: YP_661165
• Protein GI: 109897910
• COG category: [S] Function unknown
• COG ID: [COG3619] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTCAC GTTTACCAAG GTGGGTGGAG TACGGCGCAT TTATATTGGC TATGATAGCT 
GGTAGTGTCA ATGCTGTAGG ATTGTTAGGC TTTACCCATC AAGCTATATC TCATTTATCA 
GGCACCGCAA CGCTGATTGG CGCAAGTTTA AGCCATGTGT CGTGGCAAGA ATCGCTTCAC 
CTTTTCGCTA TTCTGCTCAG CTTTATGCTG GGGGCGGCTT TCTCTGGCTT TTTCTTACGT 
AATCGTACTC TCAAGTTATC TCGCCACTAT GACTTTTTAC TTTTCACCGA AGGATGCCTT 
TTATTGCTAT CTATTTGGTT ACTTAGAGAT AATTACGCTG CTGGTCACTA TACTGCGTCA 
GCTGCATGTG GTTTGCAAAA TGCGCTAGCA ACCACCTACA GCGGAGCCAT TATCCGGACC 
ACTCACATGA CAGGGATTTT CACCGATTTG GGGATCATGC TAGGCGAACG GTTACGGCAG 
AAAACCTTTG ATAAACGCAA AATGATATTG TTTTTATTAC TAATCAGCGG CTTTATTAGT 
GGTGGAGTGA TGGGCACCAG TTTATTTACC TACTTCGGCT TTAACGCGTT GTTAGTGCCG 
GCATCACTAT GCTTTGCGCT GGCGCTGAGC TATCGCGTTT ATCGCAACAA AATGAAAAGA 
AGGCGCTAA 

 

Protein sequence

MISRLPRWVE YGAFILAMIA GSVNAVGLLG FTHQAISHLS GTATLIGASL SHVSWQESLH 
LFAILLSFML GAAFSGFFLR NRTLKLSRHY DFLLFTEGCL LLLSIWLLRD NYAAGHYTAS 
AACGLQNALA TTYSGAIIRT THMTGIFTDL GIMLGERLRQ KTFDKRKMIL FLLLISGFIS 
GGVMGTSLFT YFGFNALLVP ASLCFALALS YRVYRNKMKR RR