| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1574 |
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| Symbol | |
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| ID | 4172566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1881722 |
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| End bp | 1882471 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054583 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_661150 |
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| Protein GI | 109897895 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0183532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATGA ATAACCGTCG ACCTATAGTC GCAGGTAATT GGAAAATGAA TGGCAACCTT
GCGTTAATTA AGCAAGTTGA AGACGCATTT TCCAAGGCTG ATGTATCTCA TGTAGATGTT
GTGGTGTGCC CACCGTTTCC TTATTTAGGT GGATTCAACG ACAGTAATTT TGCCTTAGGT
GGCCAAAATA TCAGTCAATA TGAATCTGGT GCGCATACTG GCGAAACTGC CGTAAGTATG
TTGAAAGAAA TGAAGTGCCA ATATGTCATA TTGGGGCATT CAGAGCGACG TGCTGATAAC
AACGAGTCAA ATGAATTGGT TGCCGACAAA GTTGAGCTGG CTTTAACCCA TAAGCTCATC
CCTTTATTTT GTGTTGGCGA ACCAGAAGAT GTGCGTGAAA GCGGACAACT ATTCGATTTT
ATCGCGGCAC AAATTGACGC GGTAATAAAT AAAGTGGGTA TTGCAGCGTT TAACGATATT
GTTATTGCCT ACGAGCCTAT TTGGGCGATT GGAACTGGCA AAACTGCGAG TCCCGAACAA
GCACAAGAAG TGCATGCATT TATACGTCAA CATTTGGCAA AGCAAGATAG CGAAATTGCT
AACCAATGCG TGATTTTATA CGGTGGAAGC GTCAAAGGCA GTAATGCTGT TGAATTGTTT
TCACAACCCG ATGTTGATGG CGGTTTGATT GGCGGAGCCA GTTTAAATCC AGAAGATTTT
TTAAGCATTT GCTTAGCGGC AAAGCGATAG
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| Protein sequence | MQMNNRRPIV AGNWKMNGNL ALIKQVEDAF SKADVSHVDV VVCPPFPYLG GFNDSNFALG
GQNISQYESG AHTGETAVSM LKEMKCQYVI LGHSERRADN NESNELVADK VELALTHKLI
PLFCVGEPED VRESGQLFDF IAAQIDAVIN KVGIAAFNDI VIAYEPIWAI GTGKTASPEQ
AQEVHAFIRQ HLAKQDSEIA NQCVILYGGS VKGSNAVELF SQPDVDGGLI GGASLNPEDF
LSICLAAKR
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