| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1571 |
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| Symbol | |
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| ID | 4172563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1877366 |
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| End bp | 1879336 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054580 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_661147 |
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| Protein GI | 109897892 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000144806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGACA TGGCAAAAAA TTTAATCTTA TGGTTGGTCA TAGCTGTCGT TTTGATGTCA
GTCTTCCAGA GTTTTTCTCC GGGAGAGTCA TCAAAGGTAC AAACGGATTA TACAACGTTT
CTTAAAGAGG CAAATCAAGG ACAAATCCGT GAAGTACGCA TAGATAGTGA ATCACGTGAA
ATCAAAGGAA CAAAACGTTC TGGGGAAAGT TTCTCTACTT ATATCCCTTA TTTTGATGAT
CAGCTTATTT CAGATCTGGT AAAACAAGAT GTAAAAATTC TTGGCGAGCC GCCTGAAGAG
CCTTCTTTAC TTACCTCTAT TTTCATCTCA TGGTTTCCTA TGTTGTTGCT TATTGGTGTG
TGGATATTCT TCATGCGTCA AATGCAAGGC GGAGGTGGCG GCCGTGGCGC TATGTCATTC
GGTAAAAGTA AAGCGCGTTT GATGGGCGAA GACCAAATCA AAACCACTTT TGCAGATGTG
GCAGGGTGTG ACGAAGCGAA AGAAGATGTG GTTGAACTTG TCGACTTCTT GCGTGATCCA
AGTAAATTCC AAAAGTTGGG CGGACGTATT CCTACAGGTG TACTGCTAGT GGGGCCTCCT
GGGACGGGTA AAACCCTTCT TGCTAAAGCC ATTGCTGGTG AAGCGAAAGT GCCATTTTTC
TCAATTTCAG GTTCTGATTT CGTTGAAATG TTTGTGGGTG TCGGTGCATC TCGTGTCCGT
GACATGTTCG AACAGGCGAA AAAAGCCGCA CCTTGTATCA TATTCATTGA TGAAATTGAT
GCTGTTGGTC GCCAACGTGG TGCCGGCATG GGCGGTGGTC ATGACGAACG TGAACAAACA
TTGAACCAGA TGTTGGTTGA AATGGATGGC TTCGGCGGGA ATGAAGGTAT TATCGTTATC
GCGGCGACTA ACCGTCCTGA CGTACTTGAC CCTGCATTAT TACGCCCAGG TCGTTTTGAC
CGTCAAGTAC ATGTTGGTTT ACCGGATATC CGAGGTCGCG AGCAGATCCT AAAAGTCCAC
ATGCGCAAAG TGCCTTTAGG AGACAACGTT GAACCGTCTT ACATCGCTCG TGGTACACCC
GGTTTCTCTG GGGCTGATTT AGCCAACCTT GTGAACGAAG CTGCATTATT TGCTGCCAGA
AGTGGTAAGC GCACCGTTTC AATGGAAGAG TTTGATAAAG CTAAAGACAA GATCATGATG
GGCTCAGAGC GCAAAAACAT GGTCATGTCA GAGGAAGAAA AAACGAATAC TGCTTATCAT
GAAGCAGGGC ATGCAATTGT TGGTCGCTTA GTACCAGAGC ACGATCCCGT GTACAAAGTA
TCGATTATCC CACGTGGACG AGCGTTGGGT GTGACCATGT ATTTGCCTGA ACAAGACAGA
TACAGCCATA GTAAACAACA TCTTGAAAGC ATGATCTCAA GTTTGTTTGG TGGCCGGATC
GCAGAAGCGC TAACGCTAGG TGAAGATCGC GTAACCACTG GTGCATCAAA CGATATTGAA
CGCGCTACCG ACATTGCCCG CAAGATGGTG ACTCAATGGG GCTTGTCTAC CAAAATGGGA
CCTATGCTTT ACGCAGAAGA AGAAGGTGAA GTGTTCCTTG GTCGCAGCAT GGCCAAATCT
AAGCATATGT CAGATGATAC AGCGCGTGCT ATCGATGCTG AAGTGAAGTC TTTAATCGAC
CGAAATTATT CACGTGCAGA GAAAATATTG ACTGATAACA TTGATATTTT ACATGCCATG
AAAGATTGTT TGATGAAATA TGAGACCATA GATGCGAAAC AAATTGATGA TCTGATGGCC
CGTACAGATG TTCGTCCTCC TGCTGATTGG ATCGAAGATT CAAAAAATGA CAACACCCCT
CCAACAGGCG GTGCATCAGT CAGTGAAGAG CCAAAAGGCG ACGCTGACGA AAAAACAGAG
ACAAACAAAT CTGATCCTAC GGTTGGTAAA CCAGGTGATG CTACCCACTA A
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| Protein sequence | MSDMAKNLIL WLVIAVVLMS VFQSFSPGES SKVQTDYTTF LKEANQGQIR EVRIDSESRE
IKGTKRSGES FSTYIPYFDD QLISDLVKQD VKILGEPPEE PSLLTSIFIS WFPMLLLIGV
WIFFMRQMQG GGGGRGAMSF GKSKARLMGE DQIKTTFADV AGCDEAKEDV VELVDFLRDP
SKFQKLGGRI PTGVLLVGPP GTGKTLLAKA IAGEAKVPFF SISGSDFVEM FVGVGASRVR
DMFEQAKKAA PCIIFIDEID AVGRQRGAGM GGGHDEREQT LNQMLVEMDG FGGNEGIIVI
AATNRPDVLD PALLRPGRFD RQVHVGLPDI RGREQILKVH MRKVPLGDNV EPSYIARGTP
GFSGADLANL VNEAALFAAR SGKRTVSMEE FDKAKDKIMM GSERKNMVMS EEEKTNTAYH
EAGHAIVGRL VPEHDPVYKV SIIPRGRALG VTMYLPEQDR YSHSKQHLES MISSLFGGRI
AEALTLGEDR VTTGASNDIE RATDIARKMV TQWGLSTKMG PMLYAEEEGE VFLGRSMAKS
KHMSDDTARA IDAEVKSLID RNYSRAEKIL TDNIDILHAM KDCLMKYETI DAKQIDDLMA
RTDVRPPADW IEDSKNDNTP PTGGASVSEE PKGDADEKTE TNKSDPTVGK PGDATH
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