Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1559 |
Symbol | |
ID | 4172551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1863639 |
End bp | 1864763 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638054568 |
Product | rod shape-determining protein RodA |
Protein accession | YP_661135 |
Protein GI | 109897880 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0999879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATGA TGCTACGCAC CAAGCTTGAC CCCAATAAGC GTTCTTTGCT CAATCGCATA CATTGTGACG GGCCGCTACT CATCGGGTTG CTGGTACTGA TGGCCGTTGG CTTAGTAACT ATATATTCTG CCGGGGGCCA AGACTGGCAA CTCATTGACC GTCAACTTAT TCGACTCGGG TTGGCGCTTG GGGTCATGTT GGCCGTGGCG CAAATTCCAC CGTTAGCCTA CCAAAAGTTA TCTATTTATT TTTATATACT CGGGATCGCC ATGTTGGTTG CGGTGATCGT ATTCGGCCAT GTAGGAAAAG GCGCTCAGCG CTGGTTGGAC TTAGGGGTAG TGCGTTTTCA ACCTTCAGAA ATCATGAAGC TTGCCGTTCC CATGATGGTG GCTTGGTACA TCAGTCAATT TAACCTTCCC CCGAAATTAA GGCACATATT ATTTGGCTTT ATTTTGGTAG GCGTTCCCAC GTTGTTGATT GCGCAACAAC CTGATTTAGG CACCTCTTTA TTAATTGCCA GCTCAGGGAT ATTCGCACTA TTCCTTGCTG GTATGAGTTG GCGCTTCATC GGAGGTATTG CCTTAGCGGT ATCCATATTC AGCCCTATCA TGTGGAACTT CCTCATGAAG GACTATCAAA AACAACGAGT ATTAACCTTC CTCAATCCAG AAAGCGACCC ATTAGGGTCT GGCTACCATA TTATTCAATC ACAAATTGCA ATAGGCTCAG GCGGCGCCGA GGGTAAGGGG TGGTTGCAAG GCACTCAGTC TCAATTAGAA TTTTTACCCG AGCGACATAC AGATTTTATT TTTGCAGTAT TTAGTGAAGA ATTTGGTTTT TGGGGCGTGG TCGGCTTATT GGCCATTTAT ACTTTCATCG TTATCCGCGG CATGATCATC GCAAACCGCG CTCAAGATGC CTTTAGTAAG CTACTCGCAG GCAGTATTAC GCTAACATTC TTTGTTTATG TATTTGTTAA TATGGGTATG GTATCGGGCA TACTACCCGT AGTCGGTGTG CCCTTGCCGC TCGTAAGCTA TGGAGGGACA TCCATGGTCA CCTTACTCGC AGGGTTTGGC ATTTTAATGG CCATCGCCAC CCAGAAACGG TTATTGTCCC GTTAA
|
Protein sequence | MNMMLRTKLD PNKRSLLNRI HCDGPLLIGL LVLMAVGLVT IYSAGGQDWQ LIDRQLIRLG LALGVMLAVA QIPPLAYQKL SIYFYILGIA MLVAVIVFGH VGKGAQRWLD LGVVRFQPSE IMKLAVPMMV AWYISQFNLP PKLRHILFGF ILVGVPTLLI AQQPDLGTSL LIASSGIFAL FLAGMSWRFI GGIALAVSIF SPIMWNFLMK DYQKQRVLTF LNPESDPLGS GYHIIQSQIA IGSGGAEGKG WLQGTQSQLE FLPERHTDFI FAVFSEEFGF WGVVGLLAIY TFIVIRGMII ANRAQDAFSK LLAGSITLTF FVYVFVNMGM VSGILPVVGV PLPLVSYGGT SMVTLLAGFG ILMAIATQKR LLSR
|
| |