| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1551 |
|---|
| Symbol | |
|---|
| ID | 4172543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1856534 |
|---|
| End bp | 1856818 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638054560 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661127 |
|---|
| Protein GI | 109897872 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.058017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTAG ATAAAGCGCA AAAACGTATC GAGAAACGGG TCAAACGTGG CTTTCACGGG
TACCCTATAA TCAGTATTCA GTATTTTGGT GAAACGAGTG CGCTAGCAAG TAAAGTGGAA
GTGAGCTTTA TAGAGCAAGA AGACGCCGCG CCAATGACGG AAAGTTTCAG TAGCGACAAC
GATATTCGCA AAGATGAAAC CGTACAAACC ACCATAATCA AAATAATTGA TCGAGTCGAT
GCCAAAACAG TAACCTTGGA CGAAACAGTC CAACCTCTAT CATAA
|
|---|
| Protein sequence | MNLDKAQKRI EKRVKRGFHG YPIISIQYFG ETSALASKVE VSFIEQEDAA PMTESFSSDN
DIRKDETVQT TIIKIIDRVD AKTVTLDETV QPLS
|
|---|
| |