| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1550 |
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| Symbol | |
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| ID | 4172542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1855822 |
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| End bp | 1856346 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054559 |
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| Product | hypothetical protein |
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| Protein accession | YP_661126 |
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| Protein GI | 109897871 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3542] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.13534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAA ATCCCCCCGT ACCCCAGCTG AGCAAAGAGC AAGTCATATC TCAGCTCAAG
TTATCTCATC ATTTTGAAGG AGGATATTTT CGCCAAACAT TCAAAGCCAA TCACAGAGAC
AAAGTCACGA CCCCTCGAGG TGACAGAACC ACTATGACGG CTATTTTCTA CATGCTGACC
GACGACAACA ACATTGATCA TTTTCACACC AAGCACTCTG ATGGCATTGA GTTTTATCAT
ATGGGTGCGC CAATCACGTA TCACATGATT TATCCTGATG GGCGATACGA GAAAGTGGTC
GTTGGGCCTG ATATCCAAAA CGGTCAGCAA CTACAACTCG CCGTTCCTGG TGGAACCTAT
AAAGCGGCTG AATTGCTTGC TGGCACATAC GGTTTGGTCA GTGAAGCGGT AGCCCCCGGT
TGGGAAAAAG AAGATATGAT AGAAATAAAC CGTGAAGCAC TACTCGAAAA ATTCCCCCAA
CATAAAACGA TAATAGACCG CTTGGCGAAT AAGAATAAGC ACTAG
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| Protein sequence | MAANPPVPQL SKEQVISQLK LSHHFEGGYF RQTFKANHRD KVTTPRGDRT TMTAIFYMLT
DDNNIDHFHT KHSDGIEFYH MGAPITYHMI YPDGRYEKVV VGPDIQNGQQ LQLAVPGGTY
KAAELLAGTY GLVSEAVAPG WEKEDMIEIN REALLEKFPQ HKTIIDRLAN KNKH
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