| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1546 |
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| Symbol | |
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| ID | 4172538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1853830 |
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| End bp | 1854567 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054555 |
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| Product | dienelactone hydrolase |
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| Protein accession | YP_661122 |
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| Protein GI | 109897867 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.770426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCATTC AATCTCATCA AGCCGTTATT TCTACGCCAA GTGGCAATAT GCAAACGTCA
ATTTACCGAC CTGTCAGTGC TGGCGCTTAT CCTAGCATTA TCTTTTATTC TGAGATATTT
CAAGAAACAG CACCAATAAC GCGCAGCGCC AAACTGCTAG CAGGACACGG ATTTGTTGTG
TTAGTACCCG AGGTGTTTCA TGAGCTAAAT CCAGCCGGGA CCGTACTTGC CTATGATGAT
ATAGGTAAAG ACAAAGGCAA TGCGGATAAA TTCGCCAAGC CTTTGGAGCA ACACGACAGC
GACACCCAAA GCATGCTCAA CTTCATCGAT TCACAGACCT ACTGCAATGC AAAGGTGGGC
TCTATGGGCG TGTGTATTGG TGGCCATCTT GCCTTTAGGG CTGCTTTGAA CCCAAGAGTA
GACGGCGCCT TTTGTTTATA CCCAACAGAC ATTCACTCCA ACACCTTACC CTGTGCTCAT
GGCAATGACT CCTTGAGCCA ATGCCCCAAA ATTAAAGCTG AGCTGTGTAT GATTTTTGGC
AAACAAGACC CACACGTATC CCGAGAAGGC AGAGAACTGA TCAACGCCAC TATGCAAGAT
CACAACCTCA ACTTCACTTG GCATGAGCTC AATGCCCAGC ATGCATTTAT GCGCGATGAA
GGTGACAGAT ACGATCCTGC TCTAGCTCTT GAGTGTTACC AAATGGCGAT ACAGATGTTC
AACCGCTGCC TGAGTTGA
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| Protein sequence | MIIQSHQAVI STPSGNMQTS IYRPVSAGAY PSIIFYSEIF QETAPITRSA KLLAGHGFVV
LVPEVFHELN PAGTVLAYDD IGKDKGNADK FAKPLEQHDS DTQSMLNFID SQTYCNAKVG
SMGVCIGGHL AFRAALNPRV DGAFCLYPTD IHSNTLPCAH GNDSLSQCPK IKAELCMIFG
KQDPHVSREG RELINATMQD HNLNFTWHEL NAQHAFMRDE GDRYDPALAL ECYQMAIQMF
NRCLS
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