| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1543 |
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| Symbol | |
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| ID | 4172535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1851381 |
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| End bp | 1851587 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638054552 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_661119 |
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| Protein GI | 109897864 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACTA CTACTGGTAC AGTTAAATGG TTCAACGAAT CTAAAGGTTT TGGTTTCATT
CAGCAAGAAA ATGGTCCTGA CGTATTTGCT CACTTCCGTG CAATTACTGG TACTGGCTTC
AAAACACTAG CTGAAGGCCA AAAAGTTGAG TTCACTGTAA CTCAAGGCCA AAAAGGTCCT
CAAGCAGAGA ATATCGTAGT ACTTTAA
|
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| Protein sequence | MSTTTGTVKW FNESKGFGFI QQENGPDVFA HFRAITGTGF KTLAEGQKVE FTVTQGQKGP
QAENIVVL
|
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