| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1541 |
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| Symbol | |
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| ID | 4172990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1848774 |
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| End bp | 1849874 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054550 |
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| Product | chorismate synthase |
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| Protein accession | YP_661117 |
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| Protein GI | 109897862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGCA ATACCTTTGG CAAGCTTTTT ACTTTAAGTA CCTTTGGCGA GAGTCATGGC
ATTGCTATTG GCGGTGTTAT CGATGGTTGT CCTCCAGGTT TAGAAATCAG TGAAGCGGAC
TTGCAAGTAG ATTTAGATCG TCGTAAACCA GGTACCTCAC GCTACACCAC AGCACGACGT
GAAGAAGACG AAGTGCAAAT TCTCTCTGGT GTGTTTGAAG GCAAAACCAC GGGTACCAGT
ATTGGTTTGC TGATTAAGAA TACCGATCAG CGCAGTAATG ATTATTCAAA AATTAAAGAT
ACCTTTAGAC CTGGTCATGC TGATTACACC TATCAGCAAA AGTACGGGCT ACGCGATTAT
CGCGGAGGAG GTCGTTCTTC TGCACGTGAA ACCGCAATTC GAGTGGCCGC AGGTGGGGTA
GCAAAAAAAT TCCTTAAGAC CCATTTAGGC ATTGAGGTGC GGGGATATTT GTCAAAGCTC
GGTCCGATTA AAATCGACAA GGTTGATCAC AGTGTGACTA ACACGAATGC GTTCTTTTGC
CCTGATGAGA GCAAGTTAGA AGCGTTAGAT GACTATATGC GTGACCTTAA AAAACAAGGT
GATTCGATTG GTGCTAAGGT TTCTGTTGTT GCGACCAATA TGCCTGTTGG ACTCGGTGAG
CCTATATTTG ACCGGCTAGA TGCTGATTTA GCCCATGCCA TGATGGGCAT TAATGCGGTA
AAAGGCGTTG AAGTGGGGGA TGGGTTTGAC ACCGTCGAAC AAAAGGGCAG TGAGCATCGT
GATTTAATGT CCGCTGATGG GTTTAAATCA AACCGTTCAG GGGGCGTTTT AGGCGGTATT
TCAAGCGGCC AGGATTTAGT GGTGCATATG GCGCTTAAAC CTACTTCAAG TATCAGCGTG
CCGGGAGAAA GCATTGACAT CAATGGCGAA ACAGCAGAGG TCGTCACCAA AGGTCGTCAC
GATCCGTGCG TGGGCATCCG AGCGGTTCCC ATTGCAGAAG CCATGATGGC CCTAGTGTTG
ATGGACCATT ATTTGCGTCA CCGCGGCCAA AACGCGGATG TGCAATCTAT CACGCCCGTT
ATTCCTGCCC AAAGTAAATA A
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| Protein sequence | MAGNTFGKLF TLSTFGESHG IAIGGVIDGC PPGLEISEAD LQVDLDRRKP GTSRYTTARR
EEDEVQILSG VFEGKTTGTS IGLLIKNTDQ RSNDYSKIKD TFRPGHADYT YQQKYGLRDY
RGGGRSSARE TAIRVAAGGV AKKFLKTHLG IEVRGYLSKL GPIKIDKVDH SVTNTNAFFC
PDESKLEALD DYMRDLKKQG DSIGAKVSVV ATNMPVGLGE PIFDRLDADL AHAMMGINAV
KGVEVGDGFD TVEQKGSEHR DLMSADGFKS NRSGGVLGGI SSGQDLVVHM ALKPTSSISV
PGESIDINGE TAEVVTKGRH DPCVGIRAVP IAEAMMALVL MDHYLRHRGQ NADVQSITPV
IPAQSK
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