| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1537 |
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| Symbol | |
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| ID | 4172986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1843573 |
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| End bp | 1844391 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054546 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_661113 |
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| Protein GI | 109897858 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGTAT CTCAGAATCA TATTGCCAAA TACATCAAGA TCACTCGCAA TCGCTGCACT
GGGTACTGCA CTGAGCGCTA TGAGTACTCG CAACATAAAC TTCTCCATCG AAAACTCCTT
GCCATCACAG ATAACATTAA ATTCGTGAGA CTAATAATTA CACAATGTCA CTATTGTCAC
ATATTACACT TTAGTCCTAT TTGTCATTTT AGTCATAAAT GGTATAAACT AATCATACGT
AATGACAGCC AAGAGAAATC AATGAAAACA TTAACCTCCG GTGAAATAGC GAAGTACTGT
GACGTTAATT TGCGCACGGT TATCCGCTGG ATTGATAGTG GCAGACTCAA AGGCTACAAG
TTGCCTGGTG GTGGTAATAA CCGTGTGAAA GAAGAAGATT TTCTCGCATT TTTGCAAGAT
AACGAGCTAC CTATCCCTAC TGAGTTTCAA ACAAAAGAGA CACGTGTGTT GATAGTTGAC
GATGAATTGC AAGTGGCAAA AGCCATAAGC CGAGTAACCA CTCGCGCCGG CTTCAAAAGT
GTTATAGCGA CAGACCCTTT TATGGCAGGT GCGTTGTTGA CCAGTTTCAA ACCGCAGTTA
ATGACACTCG ATTTAAGCAT GCCTGGGGTT AACGGTTATG ACATCGTTAA ATTTGCCCGC
CATGATTACG ACGATAAATC GTTGAAAATA CTAATTATTT CAGCCCTAGG AGAAGAGCAA
CGACAACAGG CAGTCGATTT GGGCGCTGAT ATGTCACTGT CTAAACCATT TTCAAACAAA
GAATTACTAA ACACGATTGA AAGCCTGCTG GTTAAATAA
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| Protein sequence | MFVSQNHIAK YIKITRNRCT GYCTERYEYS QHKLLHRKLL AITDNIKFVR LIITQCHYCH
ILHFSPICHF SHKWYKLIIR NDSQEKSMKT LTSGEIAKYC DVNLRTVIRW IDSGRLKGYK
LPGGGNNRVK EEDFLAFLQD NELPIPTEFQ TKETRVLIVD DELQVAKAIS RVTTRAGFKS
VIATDPFMAG ALLTSFKPQL MTLDLSMPGV NGYDIVKFAR HDYDDKSLKI LIISALGEEQ
RQQAVDLGAD MSLSKPFSNK ELLNTIESLL VK
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