| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1527 |
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| Symbol | |
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| ID | 4172976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1833368 |
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| End bp | 1834060 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054536 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_661103 |
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| Protein GI | 109897848 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.255733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATC AACAACAGAT ACTGATTGTG GAAGATGAGC CCAAAATCGC TCAAATATTG
GTCGATTTTC TGACCATTGA AGGCTTTGCT ACACAAGTCG TCCATAATGG TGATGAAGCA
GAAGATGCCA TCAGGACCAA AACGCCTGAC TGTGTCATCC TCGATTTAAT GCTACCGGGT
AAAGATGGTT TGAGTATATG TAAGGATGTG CGCAAATTTT CGCAAGTGCC GATTATTATG
CTTACCGCAA GGGTAGATGA AATTGACCGC TTAATGGGTT TGGGTTTCGG TGCTGACGAT
TACGTTTGCA AACCTTTTTC GCCCCGAGAA GTGGTCGCAC GAGTACAAGC CATTTTGCGC
AGAGCCACAT TTGCAGCTCC TTCATCAGAT GAAACCTGTA TTTTAACGTT CAAACATATC
AGCTTAAATA CTGAGCGCTT TGAGTGTGAG ATTAATAAAC AAGTGACCGA ACTTACTCCT
GTCGAGTTTC GCCTGCTCAA AACACTGATG AGTCGACCAG GAACGGTTTT TTCTAGAGAG
AGCTTGATGC AGAGCTGTTA TGAAGACGCC AGAATTGTGA GCAATCGTAC TATCGACAGC
CACATGAAAA ATCTGCGCAA TAAAGTCGCA CTTACAAATG ATCCTCAACC TATTTTGCAG
TCTGTTTATG GCGTGGGTTA TAAACTGATG TAA
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| Protein sequence | MSNQQQILIV EDEPKIAQIL VDFLTIEGFA TQVVHNGDEA EDAIRTKTPD CVILDLMLPG
KDGLSICKDV RKFSQVPIIM LTARVDEIDR LMGLGFGADD YVCKPFSPRE VVARVQAILR
RATFAAPSSD ETCILTFKHI SLNTERFECE INKQVTELTP VEFRLLKTLM SRPGTVFSRE
SLMQSCYEDA RIVSNRTIDS HMKNLRNKVA LTNDPQPILQ SVYGVGYKLM
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