| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1519 |
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| Symbol | |
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| ID | 4172968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1824159 |
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| End bp | 1825355 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054528 |
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| Product | peptidase M14, carboxypeptidase A |
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| Protein accession | YP_661095 |
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| Protein GI | 109897840 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCATA AAGAATGGAA TGCTATCACC ATGCTTAGAT ATTTTTTCCC CTTAGTATTA
CTCGCCACGT TTTCAGCATT TAGTCAGGCC AAAGACTGCC AATTTGACGA TGTCACCTTT
CATAGCGACT TTAGCACTGC CCGTTTGAGT ACCTGCGAAC GGTTGGCTAA ACATGAATAC
CATATTGGTA TTTTGCCAGA AAATGAGCCG GTTAATCCTA GCCCTTGGTT TGGTTTTAAA
GTTCAGTCAG AACAAAATGC CCAGATAACG CTTAAACTGA CGTTCAATGG CAACAACCCC
CGCTATTTAC CAAAACTCAG TACGGATGGC ACTCAGTGGC AAAACATTCC GTTTAACACT
AAAGGCAAAG AAATGTGGAT CAGCCTGAAC ACAGGCAAAG AGCCAATTTG GATTTCAGCC
CAAGAAGCCA TTGATAATCA AGAGTATGAC GATTGGCTAG CCAGTCTCAA AAAACAGCAA
CCCTCCCTTG AGGTTGAAAC GTTAGGGCAA TCAGAAAAGG GCCGGCCAAT CAAAGCGTTG
ATTAAACAGT CGCCGAAGAA TAACGAATGG CTAGTGATCA TAGGACGCCA ACACCCGCCA
GAAGTGACAG GGGCCATGGC GCTATTTGCT TTCAGTGAAG CCCTATTACT GGATGAGGCA
TTAAGTACCC CGTTCTTTGA ACGCTTTAAC GTTCTGATGG TGCCAGATTT GAACCCTGAC
GGCGTTGAAA CCGGTAACTG GCGACACAAT GCCAATGGCA TTGACCTTAA CCGAGACTGG
AAAAACTTCG CTCAAGCAGA AACGCGGCTG GTACGAGACA AAATGACCAG CATAGTGCAA
GGCGGCGGTA AAATTGTATT TGCGGTAGAT TTTCACTCAA CCTTTCATGA TGTTTTTTAC
ACCATGCCAG ATGATCATGA TTTAGCACCT ATCCCTTTGA TGGCCGGCTG GTTATCCGAT
TTAGATGCCG AGACAGGTTG GGTTTTCAAA ACCGTGAATA AGTCAGCCTC ATCACCGGAT
CGCGGAATAT TCAAGCAGTA CATCGCCGAT CACTATAAAG TACACGGGGT CACCTACGAA
GTGGGTGATA ACACCAATCG CCAACTTATT CCTTATGTTG CAAAGCAAGC TGCCAAAGCC
TTGGTAGAAA ACCTGTTAGA CGTTGAACCA GAAGCATTTT ATGTTGATAA AAAATAA
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| Protein sequence | MTHKEWNAIT MLRYFFPLVL LATFSAFSQA KDCQFDDVTF HSDFSTARLS TCERLAKHEY
HIGILPENEP VNPSPWFGFK VQSEQNAQIT LKLTFNGNNP RYLPKLSTDG TQWQNIPFNT
KGKEMWISLN TGKEPIWISA QEAIDNQEYD DWLASLKKQQ PSLEVETLGQ SEKGRPIKAL
IKQSPKNNEW LVIIGRQHPP EVTGAMALFA FSEALLLDEA LSTPFFERFN VLMVPDLNPD
GVETGNWRHN ANGIDLNRDW KNFAQAETRL VRDKMTSIVQ GGGKIVFAVD FHSTFHDVFY
TMPDDHDLAP IPLMAGWLSD LDAETGWVFK TVNKSASSPD RGIFKQYIAD HYKVHGVTYE
VGDNTNRQLI PYVAKQAAKA LVENLLDVEP EAFYVDKK
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